RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 FAM90A16PA6NEW6 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A20PA6NIJ5 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A9PA6NNJ1 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A12PA8MX19 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A5PA8MXJ8 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 SNRNP70P08621 437 aaKnown RBP15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A15PP0C7V4 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A13PP0C7W8 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A14PP0C7W9 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A24PP0C7X0 464 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 RASSF2P50749 326 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 PRRX1P54821 245 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 EFNB1P98172 346 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 ATP6AP1Q15904 470 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 NKAPLQ5M9Q1 402 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 ZDHHC13Q8IUH4 622 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 PRSS35Q8N3Z0 413 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 OR4D6Q8NGJ1 314 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 PP6455Q8WZ26 134 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 C10orf35Q96D05 121 aa15.36■□□□□ 0.05
SMPDL3A-202ENST00000487215 LOC107986453A0A1B0GWG9 222 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 ODAMA1E959 279 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 METTL15A6NJ78 407 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 ZAR1LA6NP61 321 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 SH2D1BO14796 132 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 RAMP3O60896 148 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 FASP25445 335 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 MTCP1P56278 107 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 THNSL2Q86YJ6 484 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 C5orf56Q8N8D9 126 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 OR56B4Q8NH76 319 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 TOMM40LQ969M1 308 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 ADAT3Q96EY9 351 aaPredicted RBP15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 COQ2Q96H96 371 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 DUX3Q96PT4 197 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 WARS2Q9UGM6 360 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 LINC00527Q9UJ94 153 aa15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 LSM4Q9Y4Z0 139 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-202ENST00000487215 IGKV1-12A0A0C4DH73 117 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 A0A1W2PQL4 384 aaPredicted RBP15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 SERPINE3A8MV23 424 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 DYNC1I1O14576 645 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 IGKV1D-12P01611 117 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 FCGR1AP12314 374 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 PDZK1IP1Q13113 114 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 C17orf58Q2M2W7 97 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 C12orf73Q69YU5 71 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 ZNF695Q8IW36 515 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 RDH10Q8IZV5 341 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 OR9G1Q8NH87 305 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 RPEQ96AT9 228 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 IL4I1Q96RQ9 567 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 COMMD4Q9H0A8 199 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 PCDHB16Q9NRJ7 776 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 ING3Q9NXR8 418 aa15.34■□□□□ 0.05
SMPDL3A-202ENST00000487215 ZNF729A6NN14 1252 aaPredicted RBP15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 APOL3O95236 402 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 CSN2P05814 226 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 OR2T7P0C7T2 308 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 UBCP0CG48 685 aaKnown RBP15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 ZNF44P15621 663 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 ATF1P18846 271 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 PRKACBP22694 351 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 NFYBP25208 207 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 EPHA2P29317 976 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 KIR3DL2P43630 455 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 LUMP51884 338 aaPredicted RBP15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 RAB25P57735 213 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 SLC35B1P78383 322 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 KRBOX4Q5JUW0 171 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 KDM4DQ6B0I6 523 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 LHFPL2Q6ZUX7 228 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 COMMD1Q8N668 190 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 DRAM1Q8N682 238 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 RFT1Q96AA3 541 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 RAX2Q96IS3 184 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 KIRREL1Q96J84 757 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 PRR25Q96S07 402 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 GABARAPL1Q9H0R8 117 aa15.33■□□□□ 0.04
SMPDL3A-202ENST00000487215 DYNC2H1Q8NCM8 4307 aaKnown RBP15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 A0A1W2PPI3 338 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 C3orf84H3BNL1 204 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 FGF16O43320 207 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 MITFO75030 526 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 SULT1C4O75897 302 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 KDM4BO94953 1096 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 TMEM11P17152 192 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 SCN1BQ07699 218 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 TMED1Q13445 227 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 HES1Q14469 280 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 ATXN7L3Q14CW9 347 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 UTS2BQ765I0 119 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 SLC35E3Q7Z769 313 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 PPIL3Q9H2H8 161 aaKnown RBP15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 AMMECR1Q9Y4X0 333 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 AP4S1Q9Y587 144 aa15.32■□□□□ 0.04
SMPDL3A-202ENST00000487215 KBTBD11-OT1A0A1B0GTJ5 212 aa15.31■□□□□ 0.04
SMPDL3A-202ENST00000487215 CCL24O00175 119 aa15.31■□□□□ 0.04
SMPDL3A-202ENST00000487215 SLC33A1O00400 549 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3A-202ENST00000487215 ATP5HO75947 161 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms