RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CEP170Q5SW79 1584 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 IGKV6-21A0A0C4DH24 114 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ARGFXA6NJG6 315 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ZNF233A6NK53 670 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 A8MUU9 505 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 BTNL10A8MVZ5 291 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CLDN25C9JDP6 229 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ATP6V1G2-DDX39BF2Z307 99 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 H0YJX3 145 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 KPNA3O00505 521 aaPredicted RBP1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 DENRO43583 198 aaKnown RBP1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 KDELR3O43731 214 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 MYO1DO94832 1006 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CDRT1O95170 752 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 LYPLA2O95372 231 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 RPN2P04844 631 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 SLC35G6P0C7Q6 338 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 STAG3L2P0CL84 134 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 COX4I1P13073 169 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 S100PP25815 95 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 GTF2H1P32780 548 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 RCVRNP35243 200 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CD79BP40259 229 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 HCCSP53701 268 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 KRTAP10-10P60014 251 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 SLC35A1P78382 337 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 SLC35B1P78383 322 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CAV1Q03135 178 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ST3GAL4Q11206 333 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 SMCO1Q147U7 214 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 UAP1Q16222 522 aaPredicted RBP1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ATP6V1FQ16864 119 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 HSD17B12Q53GQ0 312 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 BRMS1LQ5PSV4 323 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CPTPQ5TA50 214 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 RESP18Q5W5W9 173 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ELP2Q6IA86 826 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 PPP1R2P3Q6NXS1 205 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ASCL4Q6XD76 172 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 LRRC52Q8N7C0 313 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 SLC35G3Q8N808 338 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 FAM172AQ8WUF8 416 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 MITD1Q8WV92 249 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 PYDC1Q8WXC3 89 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 TMEM234Q8WY98 164 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CPNE4Q96A23 557 aaPredicted RBP1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 FAM131CQ96AQ9 280 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 TMEM159Q96B96 161 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 RMI2Q96E14 147 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CYTH2Q99418 400 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 TMEM109Q9BVC6 243 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CHID1Q9BWS9 393 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 MND1Q9BWT6 205 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ULBP2Q9BZM5 246 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ING2Q9H160 280 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 GAL3ST2Q9H3Q3 398 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 PLEKHF2Q9H8W4 249 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 EFCAB1Q9HAE3 211 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 MAT2BQ9NZL9 334 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 FLVCR2Q9UPI3 526 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 BAIAP2Q9UQB8 552 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ASB4Q9Y574 426 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 KIF20BQ96Q89 1820 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ARHGEF11O15085 1522 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 ADGRB3O60242 1522 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 DOCK8Q8NF50 2099 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 A0A1W2PP64 1363 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 NESP48681 1621 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 MRC2Q9UBG0 1479 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 ITSN1Q15811 1721 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 DIP2AQ14689 1571 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TUBGCP6Q96RT7 1819 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 NPHP4O75161 1426 aaPredicted RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 NOS1P29475 1434 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TRAPPC8Q9Y2L5 1435 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 MYH1P12882 1939 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 MYH6P13533 1939 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 MYH2Q9UKX2 1941 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 MYH4Q9Y623 1939 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TRAV8-4A0A0B4J246 113 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 IGHV2OR16-5A0A0B4J2B6 119 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 CCL15-CCL14A0A0B4J2E2 113 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 PNMA8CA0A1B0GUJ8 204 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 FAM92AA1XBS5 289 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SIGLEC16A6NMB1 481 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 F8W036 122 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 KCNK1O00180 336 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 LGALS9O00182 355 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 PGRMC1O00264 195 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TOR1AO14656 332 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 CST8O60676 142 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SCO1O75880 301 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SULT1C4O75897 302 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 DEXIO95424 95 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 PTTG1O95997 202 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 P01737 135 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TNNC2P02585 160 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 IFNA4P05014 189 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 S100A8P05109 93 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TRAPPC2P0DI81 140 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms