RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 DCDC5Q6ZRR9 648 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 MUC20Q8N307 709 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-229ENST00000486665 ZNRF1Q8ND25 227 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 C6orf62Q9GZU0 229 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-229ENST00000486665 SHARPINQ9H0F6 387 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 ABCG5Q9H222 651 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 MMP27Q9H306 513 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 ZNF665Q9H7R5 613 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 IFT22Q9H7X7 185 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 CTSZQ9UBR2 303 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 GLS2Q9UI32 602 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 ABCA1O95477 2261 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A10PA6NDY2 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A18PA6NE21 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A16PA6NEW6 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A20PA6NIJ5 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A8PA6NJQ4 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A7PA6NKC0 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A22PA8MWA6 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A12PA8MX19 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A5PA8MXJ8 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A23PA8MXZ1 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 SIGLEC5O15389 551 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 TMPRSS2O15393 492 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 NDUFA2O43678 99 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 ZNF737O75373 536 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A15PP0C7V4 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A13PP0C7W8 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A14PP0C7W9 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 FAM90A24PP0C7X0 464 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 BLVRBP30043 206 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-229ENST00000486665 LMO4P61968 165 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 PLAC9Q5JTB6 97 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 ATAD3CQ5T2N8 411 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 ZNF841Q6ZN19 808 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 C17orf107Q6ZR85 190 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 LINC00596Q86U02 117 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 LAX1Q8IWV1 398 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 IZUMO1Q8IYV9 350 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 BPIFB2Q8N4F0 458 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 SPICQ8N5J4 248 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 SUMF2Q8NBJ7 301 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 OR4S1Q8NGB4 309 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 OR56B1Q8NGI3 324 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 OR10R2Q8NGX6 335 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 CLDND2Q8NHS1 167 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 SPATA3Q8NHX4 192 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 CMTM3Q96MX0 182 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 CHST6Q9GZX3 395 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 DNTTIP1Q9H147 329 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 PATZ1Q9HBE1 687 aaKnown RBP10.62□□□□□ -0.71
HDAC6-229ENST00000486665 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
HDAC6-229ENST00000486665 KAAG1Q9UBP8 84 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 PEX16Q9Y5Y5 336 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 A3GALT2U3KPV4 340 aa10.62□□□□□ -0.71
HDAC6-229ENST00000486665 SVEP1Q4LDE5 3571 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 A0A096LNT2 108 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 METTL21EPA6NDL7 271 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 NKX6-3A6NJ46 265 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 F5H0A9 414 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-229ENST00000486665 HSPB6O14558 160 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 RGS5O15539 181 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 PDCD6O75340 191 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 CRLF1O75462 422 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 APOA1P02647 267 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 FUT3P21217 361 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 CDK2P24941 298 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 CHATP28329 748 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 IL2RGP31785 369 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 OR3A1P47881 315 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 SEC61A1P61619 476 aaKnown RBP10.61□□□□□ -0.71
HDAC6-229ENST00000486665 IL13RA1P78552 427 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 MADCAM1Q13477 382 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 NKAPLQ5M9Q1 402 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 OLFML2AQ68BL7 652 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 RAB12Q6IQ22 244 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 Q6ZTK2 550 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 C6orf201Q7Z4U5 140 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 ZNF561Q8N587 486 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 CHST4Q8NCG5 386 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 OR4M1Q8NGD0 313 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 OR6Q1Q8NGQ2 317 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 S100A16Q96FQ6 103 aaKnown RBP10.61□□□□□ -0.71
HDAC6-229ENST00000486665 MED30Q96HR3 178 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 ARHGAP5-AS1Q96IT6 56 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 SNX22Q96L94 193 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 SULT4A1Q9BR01 284 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 FAAP24Q9BTP7 215 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 DPCDQ9BVM2 203 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-229ENST00000486665 PECRQ9BY49 303 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 MIOXQ9UGB7 285 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 PCDHB10Q9UN67 800 aa10.61□□□□□ -0.71
HDAC6-229ENST00000486665 TRAV18A0A075B6X5 111 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 UBE2QL1A1L167 161 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 FAM25AB3EWG3 89 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 FAM25CB3EWG5 89 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 FAM25GB3EWG6 89 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 K7N7A8 449 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 DVL1O14640 695 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms