RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 FAM25AB3EWG3 89 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 FAM25CB3EWG5 89 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 FAM25GB3EWG6 89 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 FAM157AC9JC47 383 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 H3BMQ9 156 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 AIPO00170 330 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 DVL1O14640 695 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 GEMIN2O14893 280 aaKnown RBP4.68□□□□□ -1.66
COPS3-208ENST00000486032 NDUFB3O43676 98 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 OR2H2O95918 312 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 KNG1P01042 644 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 IGHV2-5P01817 119 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 CHRM2P08172 466 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 WNT2P09544 360 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 UBBP0CG47 229 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 AMY2BP19961 511 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 SOX6P35712 828 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 PITPNBP48739 271 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 VEGFCP49767 419 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 RORCP51449 518 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 EFNB2P52799 333 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 EDDM3BP56851 147 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 RBM11P57052 281 aaKnown RBP4.68□□□□□ -1.66
COPS3-208ENST00000486032 ERVK11-1P61568 191 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 IL13RA1P78552 427 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 UNC119Q13432 240 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 ATXN7L3Q14CW9 347 aaPredicted RBP4.68□□□□□ -1.66
COPS3-208ENST00000486032 GRK1Q15835 563 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 TMEM155Q4W5P6 130 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 ESCO2Q56NI9 601 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 PAN3Q58A45 887 aaKnown RBP4.68□□□□□ -1.66
COPS3-208ENST00000486032 LRRC10Q5BKY1 277 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 FAM166AQ6J272 317 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 ASCL4Q6XD76 172 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 ZNF788Q6ZQV5 615 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 DNM1P46Q6ZS02 220 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 LYPD6Q86Y78 171 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 CDH26Q8IXH8 852 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 BPIFB2Q8N4F0 458 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 TPRX1Q8N7U7 411 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 OR4M1Q8NGD0 313 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 OR5H6Q8NGV6 325 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 ANGPTL6Q8NI99 470 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 KCNG3Q8TAE7 436 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 DYRK2Q92630 601 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 PHF21AQ96BD5 680 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 RAB39BQ96DA2 213 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 MED30Q96HR3 178 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 CYYR1Q96J86 154 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 C1orf147Q96MC9 270 aaPredicted RBP4.68□□□□□ -1.66
COPS3-208ENST00000486032 NEDD4LQ96PU5 975 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 NICN1Q9BSH3 213 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 URM1Q9BTM9 101 aaKnown RBP4.68□□□□□ -1.66
COPS3-208ENST00000486032 BARHL1Q9BZE3 327 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 ATG5Q9H1Y0 275 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 PPA2Q9H2U2 334 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 HES4Q9HCC6 221 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 IL36GQ9NZH8 169 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 GHRLQ9UBU3 117 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 SLC25A10Q9UBX3 287 aaPredicted RBP4.68□□□□□ -1.66
COPS3-208ENST00000486032 CLN8Q9UBY8 286 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 MIOXQ9UGB7 285 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 OR5V1Q9UGF6 321 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 MAB21L2Q9Y586 359 aa4.68□□□□□ -1.66
COPS3-208ENST00000486032 ACANP16112 2415 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 CREBBPQ92793 2442 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 CUBNO60494 3623 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 TRAV39A0A0B4J263 110 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SMIM31A0A1B0GVY4 71 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 A0A1W2PQ09 198 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 TMEM82A0PJX8 343 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 TMEM14DPA8MWL7 114 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SIGLEC5O15389 551 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SOCS1O15524 211 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 RGS5O15539 181 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 NDUFA2O43678 99 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 TGFAP01135 160 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 ACAA1P09110 424 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 ZNF16P17020 682 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 ZNF182P17025 639 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 CPT2P23786 658 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 BLVRBP30043 206 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 RANBP1P43487 201 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 BMXP51813 675 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 LMO4P61968 165 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 RPS27AP62979 156 aaKnown RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 LOXL1Q08397 574 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 IL13RA2Q14627 380 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 ZNF146Q15072 292 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 MPV17LQ2QL34 196 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SPIN3Q5JUX0 258 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 FOXB2Q5VYV0 432 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 WDR25Q64LD2 544 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 ELP2Q6IA86 826 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 Q6P435 159 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 MZT2AQ6P582 158 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 Q71RC1 249 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 GDPD3Q7L5L3 318 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 OR2W3Q7Z3T1 314 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 RTN4RL2Q86UN3 420 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms