RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 IGHV1-69DA0A0B4J2H0 117 aa17.17■□□□□ 0.34
SEC13-217ENST00000482647 hADV38S2A0JD32 116 aa17.17■□□□□ 0.34
SEC13-217ENST00000482647 IGHV1-69P01742 117 aa17.17■□□□□ 0.34
SEC13-217ENST00000482647 PRTN3P24158 256 aa17.17■□□□□ 0.34
SEC13-217ENST00000482647 ERP29P30040 261 aaKnown RBP17.17■□□□□ 0.34
SEC13-217ENST00000482647 NCR3LG1Q68D85 454 aa17.17■□□□□ 0.34
SEC13-217ENST00000482647 LINC00596Q86U02 117 aa17.17■□□□□ 0.34
SEC13-217ENST00000482647 BCL6BQ8N143 479 aaPredicted RBP17.17■□□□□ 0.34
SEC13-217ENST00000482647 MRPS24Q96EL2 167 aaKnown RBP17.17■□□□□ 0.34
SEC13-217ENST00000482647 UNKLQ9H9P5 680 aaKnown RBP17.17■□□□□ 0.34
SEC13-217ENST00000482647 SIRT7Q9NRC8 400 aa17.17■□□□□ 0.34
SEC13-217ENST00000482647 GHRLQ9UBU3 117 aa17.17■□□□□ 0.34
SEC13-217ENST00000482647 TNFAIP8O95379 198 aa17.16■□□□□ 0.34
SEC13-217ENST00000482647 CALRP27797 417 aaKnown RBP17.16■□□□□ 0.34
SEC13-217ENST00000482647 P2RX3P56373 397 aa17.16■□□□□ 0.34
SEC13-217ENST00000482647 RBM11P57052 281 aaKnown RBP17.16■□□□□ 0.34
SEC13-217ENST00000482647 GUCA2AQ02747 115 aa17.16■□□□□ 0.34
SEC13-217ENST00000482647 CD200R1LQ6Q8B3 271 aa17.16■□□□□ 0.34
SEC13-217ENST00000482647 METAP1DQ6UB28 335 aaPredicted RBP17.16■□□□□ 0.34
SEC13-217ENST00000482647 BRD3OSQ6XYD6 125 aa17.16■□□□□ 0.34
SEC13-217ENST00000482647 JMJD8Q96S16 334 aa17.16■□□□□ 0.34
SEC13-217ENST00000482647 PPA2Q9H2U2 334 aa17.16■□□□□ 0.34
SEC13-217ENST00000482647 TRAV24A0A0B4J272 114 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 TRDV1A0A1B0GX56 115 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 OR7C1O76099 320 aaPredicted RBP17.15■□□□□ 0.34
SEC13-217ENST00000482647 CSN2P05814 226 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 UBBP0CG47 229 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 ZNF728P0DKX0 622 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 CCL3L1P16619 93 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 GALP22466 123 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 ZNF273Q14593 569 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 PAN3Q58A45 887 aaKnown RBP17.15■□□□□ 0.34
SEC13-217ENST00000482647 C1orf100Q5SVJ3 147 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 PDZD9Q8IXQ8 264 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 TPRX1Q8N7U7 411 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 TNFRSF14Q92956 283 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 IFT22Q9H7X7 185 aa17.15■□□□□ 0.34
SEC13-217ENST00000482647 FBN1P35555 2871 aaKnown RBP17.15■□□□□ 0.34
SEC13-217ENST00000482647 A0A1W2PP11 408 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 GEMIN2O14893 280 aaKnown RBP17.14■□□□□ 0.33
SEC13-217ENST00000482647 CD37P11049 281 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 PSMD7P51665 324 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 HILS1P60008 231 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 AESQ08117 197 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 MPV17LQ2QL34 196 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 RUSC1-AS1Q66K80 236 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 SIGLECL1Q8N7X8 197 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 C1orf147Q96MC9 270 aaPredicted RBP17.14■□□□□ 0.33
SEC13-217ENST00000482647 ZNF714Q96N38 554 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 CST11Q9H112 138 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 LINC00312Q9Y6C7 94 aa17.14■□□□□ 0.33
SEC13-217ENST00000482647 C17orf98A8MV24 154 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 RNASEK-C17orf49H0YIS7 233 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 HSPB6O14558 160 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 CRTAPO75718 401 aaPredicted RBP17.13■□□□□ 0.33
SEC13-217ENST00000482647 HTR2CP28335 458 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 KCNJ3P48549 501 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 UBE2E1P51965 193 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 DLX6P56179 175 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 NEDD8Q15843 81 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 TAF9Q16594 264 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 TUSC1Q2TAM9 212 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 KRBOX4Q5JUW0 171 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 SYT6Q5T7P8 510 aaPredicted RBP17.13■□□□□ 0.33
SEC13-217ENST00000482647 C11orf42Q8N5U0 333 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 TSPAN14Q8NG11 270 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 OR6M1Q8NGM8 313 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 DPCDQ9BVM2 203 aaPredicted RBP17.13■□□□□ 0.33
SEC13-217ENST00000482647 BARHL1Q9BZE3 327 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 HEXA-AS1Q9H8Q6 139 aa17.13■□□□□ 0.33
SEC13-217ENST00000482647 UBE2J1Q9Y385 318 aaPredicted RBP17.13■□□□□ 0.33
SEC13-217ENST00000482647 AK6Q9Y3D8 172 aaKnown RBP17.13■□□□□ 0.33
SEC13-217ENST00000482647 SOX21Q9Y651 276 aaPredicted RBP17.13■□□□□ 0.33
SEC13-217ENST00000482647 A0A087WXM4 84 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 TRGV10A0A0A0MS01 117 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 TRAV1-2A0A0B4J238 106 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 MEX3AA1L020 520 aaKnown RBP17.12■□□□□ 0.33
SEC13-217ENST00000482647 SLC22A1O15245 554 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 RBP4P02753 201 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 MGMTP16455 207 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 GLIPR1P48060 266 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 DLX1P56177 255 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 ERVFRD-1P60508 538 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 PRB3Q04118 309 aaPredicted RBP17.12■□□□□ 0.33
SEC13-217ENST00000482647 ATXN7L3Q14CW9 347 aaPredicted RBP17.12■□□□□ 0.33
SEC13-217ENST00000482647 TRAPPC6BQ86SZ2 158 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 SUMF2Q8NBJ7 301 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 TMEM104Q8NE00 496 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 SELENOIQ9C0D9 397 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 BANF2Q9H503 90 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 PLGRKTQ9HBL7 147 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 SPACA1Q9HBV2 294 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 VCX3AQ9NNX9 186 aa17.12■□□□□ 0.33
SEC13-217ENST00000482647 ODAMA1E959 279 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 H3BUI4 141 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 PDCD5O14737 125 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 VENTXO95231 258 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 RANBP1P43487 201 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 SRSF2Q01130 221 aaKnown RBP17.11■□□□□ 0.33
SEC13-217ENST00000482647 ATAD3CQ5T2N8 411 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms