RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 HAND1O96004 215 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 LYL1P12980 280 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 CD34P28906 385 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 CEACAM3P40198 252 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 RAB25P57735 213 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 ROM1Q03395 351 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 HLA-DRB5Q30154 266 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 SLC35D3Q5M8T2 416 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 C9orf66Q5T8R8 295 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 HEPN1Q6WQI6 88 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 EGFL6Q8IUX8 553 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 CPOQ8IVL8 374 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 BBS1Q8NFJ9 593 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 OR8J1Q8NGP2 316 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 OR14K1Q8NGZ2 314 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 CNIH3Q8TBE1 160 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 TRMT10AQ8TBZ6 339 aaKnown RBP13.66□□□□□ -0.22
RXRB-203ENST00000481441 TMEM163Q8TC26 289 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 FBLIM1Q8WUP2 373 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 APH1BQ8WW43 257 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 TRUB1Q8WWH5 349 aaKnown RBP13.66□□□□□ -0.22
RXRB-203ENST00000481441 YIPF3Q9GZM5 350 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 SORL1Q92673 2214 aa13.66□□□□□ -0.22
RXRB-203ENST00000481441 A0A1B0GTI1 187 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM172BPA6NC97 362 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A18PA6NE21 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A16PA6NEW6 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A20PA6NIJ5 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A9PA6NNJ1 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A12PA8MX19 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A5PA8MXJ8 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 BUB1B-PAK6H3BSN5 160 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 SRSF10O75494 262 aaKnown RBP13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A15PP0C7V4 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A13PP0C7W8 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A14PP0C7W9 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM90A24PP0C7X0 464 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 FAM106CPP0CH98 169 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 SLC2A5P22732 501 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 GABRR1P24046 479 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 CDK2P24941 298 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 ERP29P30040 261 aaKnown RBP13.65□□□□□ -0.22
RXRB-203ENST00000481441 GDNFP39905 211 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 P2RX3P56373 397 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 SNRPGP62308 76 aaKnown RBP13.65□□□□□ -0.22
RXRB-203ENST00000481441 ZNF829Q3KNS6 432 aaPredicted RBP13.65□□□□□ -0.22
RXRB-203ENST00000481441 LAIR2Q6ISS4 152 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 Q6ZSR3 168 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 BCDIN3DQ7Z5W3 292 aaKnown RBP13.65□□□□□ -0.22
RXRB-203ENST00000481441 TRAPPC6BQ86SZ2 158 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 ZNF679Q8IYX0 411 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 COMMD1Q8N668 190 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 SLAMF9Q96A28 289 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 CREB3L1Q96BA8 519 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 ZNF286AQ9HBT8 521 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 IL36RNQ9UBH0 155 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 LINC00527Q9UJ94 153 aa13.65□□□□□ -0.22
RXRB-203ENST00000481441 IGKV1-27A0A075B6S5 117 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 FAM230AA0A1W2PPH8 454 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 SERPINE3A8MV23 424 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 OOSP1A8MZH6 123 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 MGST3O14880 152 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 MPZL2O60487 215 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 WBP4O75554 376 aaKnown RBP13.64□□□□□ -0.23
RXRB-203ENST00000481441 INMTO95050 263 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 MNDAP41218 407 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 RIDAP52758 137 aaKnown RBP13.64□□□□□ -0.23
RXRB-203ENST00000481441 RPS7P62081 194 aaKnown RBP13.64□□□□□ -0.23
RXRB-203ENST00000481441 ZNF91Q05481 1191 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 CCDC144NLQ6NUI1 221 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 THNSL2Q86YJ6 484 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 C5orf56Q8N8D9 126 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 OR5M8Q8NGP6 311 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 GAL3ST2Q9H3Q3 398 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 COPS3Q9UNS2 423 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 DHRS7CA6NNS2 312 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 ENTPD6O75354 484 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 OR3A1P47881 315 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 SLC35B1P78383 322 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 SMN1Q16637 294 aaKnown RBP13.64□□□□□ -0.23
RXRB-203ENST00000481441 DEFB136Q30KP8 78 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 C6orf141Q5SZD1 244 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 UTF1Q5T230 341 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 AADACL4Q5VUY2 407 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 SLC25A26Q70HW3 274 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 ELMOD2Q8IZ81 293 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 EMG1Q92979 244 aaKnown RBP13.64□□□□□ -0.23
RXRB-203ENST00000481441 TTTY10Q9BZA0 68 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 PALMDQ9NP74 551 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 CLN6Q9NWW5 311 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 ZNF256Q9Y2P7 627 aaPredicted RBP13.64□□□□□ -0.23
RXRB-203ENST00000481441 SMAD5-AS1Q9Y6J3 95 aa13.64□□□□□ -0.23
RXRB-203ENST00000481441 LYSTQ99698 3801 aa13.63□□□□□ -0.23
RXRB-203ENST00000481441 SEC14L6B5MCN3 397 aa13.63□□□□□ -0.23
RXRB-203ENST00000481441 LOC110117498-PIK3R3F6TDL0 507 aa13.63□□□□□ -0.23
RXRB-203ENST00000481441 TOR1AO14656 332 aa13.63□□□□□ -0.23
RXRB-203ENST00000481441 IGHG2P01859 326 aa13.63□□□□□ -0.23
RXRB-203ENST00000481441 DUSP1P28562 367 aa13.63□□□□□ -0.23
RXRB-203ENST00000481441 UBE2V2Q15819 145 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms