RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ZCCHC7Q8N3Z6 543 aaKnown RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 FAM71E2Q8N5Q1 922 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 TMEM86BQ8N661 226 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF433Q8N7K0 673 aaPredicted RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ANKFN1Q8N957 763 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 NKAPP1Q8N9T2 125 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 IPMKQ8NFU5 416 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 OR4D5Q8NGN0 318 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 GRPEL2Q8TAA5 225 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 CYGBQ8WWM9 190 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 TSLPQ969D9 159 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 TAMM41Q96BW9 452 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ROPN1LQ96C74 230 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 SEC22AQ96IW7 307 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 RBM14Q96PK6 669 aaKnown RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 PITX2Q99697 317 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 SH3GL1Q99961 368 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 HOPXQ9BPY8 73 aaPredicted RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 DCUN1D5Q9BTE7 237 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ANKRD60Q9BZ19 345 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 RMND5AQ9H871 391 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 LRRC40Q9H9A6 602 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 FOLH1BQ9HBA9 442 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 IL20Q9NYY1 176 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 BFARQ9NZS9 450 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF225Q9UK10 706 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 KIAA1257Q9ULG3 409 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 SNX6Q9UNH7 406 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ERGIC3Q9Y282 383 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 MRPS33Q9Y291 106 aaKnown RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 CAB39Q9Y376 341 aaPredicted RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 FAT3Q8TDW7 4589 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ARPC4-TTLL3A0A0A6YYG9 625 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 ISPDA4D126 451 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 A6NIZ1 184 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 SLC22A20A6NK97 555 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 FAM159BA6NKW6 160 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 DCTN6O00399 190 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 UBDO15205 165 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 SLC22A1O15245 554 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 VAPBO95292 243 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 PAHP00439 452 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 PNMTP11086 282 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 COL8A2P25067 703 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 DCKP27707 260 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 LAP3P28838 519 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 SDC4P31431 198 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 S100A5P33763 92 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 MAGEA6P43360 314 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 PKNOX1P55347 436 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 TAS2R19P59542 299 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 RAP1BP61224 184 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 MRPS15P82914 257 aaKnown RBP3.19□□□□□ -1.9
CCDC171-207ENST00000478913 TGFBR3Q03167 851 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 UNC119Q13432 240 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 GANABQ14697 944 aaKnown RBP3.19□□□□□ -1.9
CCDC171-207ENST00000478913 RBM48Q5RL73 367 aaKnown RBP3.19□□□□□ -1.9
CCDC171-207ENST00000478913 TMEM225Q6GV28 225 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 FRMPD2BQ6IN97 320 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 SLC25A24Q6NUK1 477 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 SCIMPQ6UWF3 145 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 ZCCHC23Q6ZST2 131 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 LINC00523Q86TU6 105 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 C10orf107Q8IVU9 208 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 OR2L13Q8N349 312 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 PNKDQ8N490 385 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 Q8N9L7 120 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 SPERTQ8NA61 448 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 TRMT10AQ8TBZ6 339 aaKnown RBP3.19□□□□□ -1.9
CCDC171-207ENST00000478913 PIGCQ92535 297 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 C12orf43Q96C57 262 aaKnown RBP3.19□□□□□ -1.9
CCDC171-207ENST00000478913 RCN3Q96D15 328 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 CENPNQ96H22 339 aaPredicted RBP3.19□□□□□ -1.9
CCDC171-207ENST00000478913 KCNA7Q96RP8 456 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 NABP2Q9BQ15 211 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 ZYG11BQ9C0D3 744 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 IL22Q9GZX6 179 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 NMRAL1Q9HBL8 299 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 ARMC1Q9NVT9 282 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 SCN3BQ9NY72 215 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 PIPOXQ9P0Z9 390 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 PSME2Q9UL46 239 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 AP3M1Q9Y2T2 418 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 NDUFAF1Q9Y375 327 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 HEY1Q9Y5J3 304 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 CACNG2Q9Y698 323 aa3.19□□□□□ -1.9
CCDC171-207ENST00000478913 IGKV1D-8A0A087WSZ0 117 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 DHRS12A0PJE2 317 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 NUPR2A6NF83 97 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 GPR89AB7ZAQ6 455 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 K7EQM0 130 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 UBXN8O00124 270 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 GNGT2O14610 69 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 MRASO14807 208 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 GMFGO60234 142 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 MRPS14O60783 128 aaKnown RBP3.18□□□□□ -1.9
CCDC171-207ENST00000478913 BANF1O75531 89 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 SULT1C4O75897 302 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 OXSR1O95747 527 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms