RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 MTCH1Q9NZJ7 389 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 CLCF1Q9UBD9 225 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 MSGN1A6NI15 193 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 ARGFXA6NJG6 315 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 ANKRD30BLA7E2S9 258 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF732B4DXR9 585 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 TRAPPC2LH3BP13 241 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 OR7C1O76099 320 aaPredicted RBP10.46□□□□□ -0.73
PTPRF-212ENST00000477970 WNT2P09544 360 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 FAM74A1Q5RGS3 127 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF880Q6PDB4 577 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 LGI3Q8N145 548 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 SLAMF9Q96A28 289 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 SAT2Q96F10 170 aaPredicted RBP10.46□□□□□ -0.73
PTPRF-212ENST00000477970 LDAHQ9H6V9 325 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 CRIM1Q9NZV1 1036 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 KIR2DS1A0A191URI9 304 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 DUXBA0A1W2PPF3 345 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 PPYP01298 95 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 KIR2DS4P43632 304 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 GPM6AP51674 278 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 GNG3P63215 75 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 SMCO1Q147U7 214 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 KIR2DS1Q14954 304 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 RNFT1Q5M7Z0 435 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 C9orf135Q5VTT2 229 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 EIF5AL1Q6IS14 154 aaKnown RBP10.46□□□□□ -0.74
PTPRF-212ENST00000477970 DYRK2Q92630 601 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 MARC2Q969Z3 335 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 LHX6Q9UPM6 363 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 TMED3Q9Y3Q3 217 aa10.46□□□□□ -0.74
PTPRF-212ENST00000477970 TUSC2O75896 110 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 FAM157CP0CG43 387 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 HERV-K104P61576 105 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 UNQ6126/PRO20091Q6UXV3 157 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 MRPL24Q96A35 216 aaKnown RBP10.45□□□□□ -0.74
PTPRF-212ENST00000477970 C1QTNF6Q9BXI9 259 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 NGFP01138 241 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 OR5AC1P0C628 307 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 ZNF14P17017 642 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-212ENST00000477970 CCNOP22674 350 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 AADACP22760 399 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 C3AR1Q16581 482 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 BHLHE23Q8NDY6 225 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 ABHD14BQ96IU4 210 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 TREM2Q9NZC2 230 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 E5RGE8 158 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 TBC1D28Q2M2D7 210 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 FAM71E2Q8N5Q1 922 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 DEFB127Q9H1M4 99 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 ARV1Q9H2C2 271 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 OR51I2Q9H344 312 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 TAS2R3Q9NYW6 316 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 FBXO9Q9UK97 447 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-212ENST00000477970 NSG2Q9Y328 171 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 ATP23Q9Y6H3 246 aa10.45□□□□□ -0.74
PTPRF-212ENST00000477970 TRDCB7Z8K6 153 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 CCL2P13500 99 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 FAM76BQ5HYJ3 339 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 SHEQ5VZ18 495 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 ZNF585AQ6P3V2 769 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 IL34Q6ZMJ4 242 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 MDP1Q86V88 176 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 GLYATL2Q8WU03 294 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 TOMM40LQ969M1 308 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 SMIM8Q96KF7 97 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 TMEM56Q96MV1 263 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 PCDHB10Q9UN67 800 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 PIGBOS1A0A0B4J2F0 54 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 NPIPB11E5RHQ5 1161 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 DIRAS3O95661 229 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 ACAA1P09110 424 aaPredicted RBP10.44□□□□□ -0.74
PTPRF-212ENST00000477970 DUSP1P28562 367 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 RPL12P30050 165 aaKnown RBP10.44□□□□□ -0.74
PTPRF-212ENST00000477970 GPR157Q5UAW9 335 aa10.44□□□□□ -0.74
PTPRF-212ENST00000477970 J3QT63 122 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 K7EPK0 472 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 AQP7O14520 342 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 JTBO76095 146 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 CDS2O95674 445 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 MDH2P40926 338 aaKnown RBP10.43□□□□□ -0.74
PTPRF-212ENST00000477970 EIF2S3P41091 472 aaKnown RBP10.43□□□□□ -0.74
PTPRF-212ENST00000477970 S100A10P60903 97 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 MRPL49Q13405 166 aaKnown RBP10.43□□□□□ -0.74
PTPRF-212ENST00000477970 HIKESHIQ53FT3 197 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 ATP1A1-AS1Q5TC04 95 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 BRICD5Q6PL45 260 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 Q8IYB0 196 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 MMP26Q9NRE1 261 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 GSKIPQ9P0R6 139 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 CLEC18AA5D8T8 446 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 MPPED1O15442 326 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 SCO1O75880 301 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 TUBG1P23258 451 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 P2RY1P47900 373 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 CLEC18CQ8NCF0 446 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 C1orf162Q8NEQ5 155 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-212ENST00000477970 IL22RA2Q969J5 263 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms