RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 KRTAP10-3P60369 221 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 RPS11P62280 158 aaKnown RBP eCLIP17.61■□□□□ 0.41
COL9A3-211ENST00000477612 LDLRAD2Q5SZI1 272 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 DYNAPQ8N1N2 210 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 TFAP2CQ92754 450 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 GHSRQ92847 366 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 PGLYRP3Q96LB9 341 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 TMEM138Q9NPI0 162 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 FBLN5Q9UBX5 448 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 PSORS1C1Q9UIG5 152 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 MEGF11A6BM72 1044 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 DEGS1O15121 323 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 IGFBP3P17936 291 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-211ENST00000477612 PAX6P26367 422 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 AESQ08117 197 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 SRSF4Q08170 494 aaKnown RBP17.6■□□□□ 0.41
COL9A3-211ENST00000477612 IL13RA2Q14627 380 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 YIF1BQ5BJH7 314 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 SLC35E4Q6ICL7 350 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 LIAT1Q6ZQX7 453 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 FOXRED1Q96CU9 486 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-211ENST00000477612 CDCA4Q9BXL8 241 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 TMEM133Q9H2Q1 129 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 NCOR1P1Q9H4R4 102 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 RAB18Q9NP72 206 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 FKBP14Q9NWM8 211 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 CMYA5Q8N3K9 4069 aa17.6■□□□□ 0.41
COL9A3-211ENST00000477612 TRGV10A0A0A0MS01 117 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 IGHV2-26A0A0B4J1V2 119 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 XPNPEP2O43895 674 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 CD1AP06126 327 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 KIR2DS4P43632 304 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 GLIPR1P48060 266 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 DYNLT3P51808 116 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 MINOS1Q5TGZ0 78 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 HEPN1Q6WQI6 88 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 TNFAIP8L1Q8WVP5 186 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 COQ2Q96H96 371 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 GPER1Q99527 375 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 PPA2Q9H2U2 334 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 GAL3ST2Q9H3Q3 398 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 IL36GQ9NZH8 169 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 MINOS1-NBL1R4GNA1 71 aa17.59■□□□□ 0.41
COL9A3-211ENST00000477612 MMP23AO75900 390 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 PTGFRP43088 359 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 TAS2R43P59537 309 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 PAX5Q02548 391 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 SCN1BQ07699 218 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 Q499Y3 187 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 OR52W1Q6IF63 320 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 SATL1Q86VE3 508 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 CLEC7AQ9BXN2 247 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 VCXQ9H320 206 aa17.58■□□□□ 0.4
COL9A3-211ENST00000477612 RANBP3Q9H6Z4 567 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-211ENST00000477612 ODAMA1E959 279 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 CGB3P0DN86 165 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 CGB7P0DN87 165 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 C21orf33P30042 268 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-211ENST00000477612 BDKRB2P30411 391 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 ZNF93P35789 620 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-211ENST00000477612 PPP3R1P63098 170 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 LY6EQ16553 131 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 NHLRC3Q5JS37 347 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 KRBOX4Q5JUW0 171 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 RNLSQ5VYX0 342 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 BRICD5Q6PL45 260 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 TRAPPC6BQ86SZ2 158 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 RTN4RL2Q86UN3 420 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 OR13C5Q8NGS8 318 aa17.57■□□□□ 0.4
COL9A3-211ENST00000477612 NKX1-2Q9UD57 310 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-211ENST00000477612 TRAV24A0A0B4J272 114 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 H0YJX3 145 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 CD34P28906 385 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 SLC34A1Q06495 639 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 RSU1Q15404 277 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 SSX2Q16385 188 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 DDI2Q5TDH0 399 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 AHSA2Q719I0 299 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 STX19Q8N4C7 294 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 NANOGP1Q8N7R0 232 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 DTX3Q8N9I9 347 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 IFT22Q9H7X7 185 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 OR6C3Q9NZP0 311 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 TCF19Q9Y242 345 aa17.56■□□□□ 0.4
COL9A3-211ENST00000477612 A0A087X0M5 115 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 TRBV5-7A0A0A0MS05 114 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 A0A1B0GX30 115 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 ZNF729A6NN14 1252 aaPredicted RBP17.55■□□□□ 0.4
COL9A3-211ENST00000477612 FSTP19883 344 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 OR3A4PP47883 348 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 KCNJ3P48549 501 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 WNT4P56705 351 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 DYNC1I2Q13409 638 aaKnown RBP17.55■□□□□ 0.4
COL9A3-211ENST00000477612 RIPK1Q13546 671 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 TREML4Q6UXN2 200 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 ZFP41Q8N8Y5 198 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 BPIFB6Q8NFQ5 453 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 OR4P4Q8NGL7 312 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 ORAI1Q96D31 301 aa17.55■□□□□ 0.4
COL9A3-211ENST00000477612 WNK1Q9H4A3 2382 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms