RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 TET2Q6N021 2002 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-204ENST00000477531 IRGMA1A4Y4 181 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 ALDOBP05062 364 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 CSN2P05814 226 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 CD2P06729 351 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 CDK2P24941 298 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 PTGFRP43088 359 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 AESQ08117 197 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 ZNF691Q5VV52 312 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 HEPN1Q6WQI6 88 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 TMPRSS11AQ6ZMR5 421 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 ABHD12Q8N2K0 398 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 C11orf44Q8N8P7 122 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 OR4D6Q8NGJ1 314 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 CAPSLQ8WWF8 208 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 ING3Q9NXR8 418 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 SMPD3Q9NY59 655 aaPredicted RBP12.68□□□□□ -0.38
CLDN11-204ENST00000477531 OR6C3Q9NZP0 311 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 DPM3Q9P2X0 92 aa12.68□□□□□ -0.38
CLDN11-204ENST00000477531 A0A0G2JK05 382 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 ODAMA1E959 279 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 E9PI62 339 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 TOR1AO14656 332 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 DCKP27707 260 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 BRS3P32247 399 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 GLIPR1P48060 266 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 MED21Q13503 144 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 LDLRAD2Q5SZI1 272 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 PRAMEF5Q5TYX0 476 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 RPL22L1Q6P5R6 122 aaKnown RBP12.67□□□□□ -0.38
CLDN11-204ENST00000477531 PXT1Q8NFP0 134 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 GPR148Q8TDV2 347 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 CREB3L1Q96BA8 519 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 AKR1E2Q96JD6 320 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 NR1H4Q96RI1 486 aaPredicted RBP12.67□□□□□ -0.38
CLDN11-204ENST00000477531 ZNF649Q9BS31 505 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 ZNF702PQ9H963 129 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 FGF20Q9NP95 211 aaPredicted RBP12.67□□□□□ -0.38
CLDN11-204ENST00000477531 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
CLDN11-204ENST00000477531 LEUTXA8MZ59 168 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 SLC33A1O00400 549 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-204ENST00000477531 FBXO24O75426 580 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 MMP23AO75900 390 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 MYL12AP19105 171 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 CEACAM3P40198 252 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 SOX2P48431 317 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 PRRX1P54821 245 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 ZP1P60852 638 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 BDH1Q02338 343 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 RSU1Q15404 277 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 CCDC58Q4VC31 144 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 KIAA2026Q5HYC2 2103 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 Q6P435 159 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 CCBE1Q6UXH8 406 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-204ENST00000477531 RNF144BQ7Z419 303 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 Q8N2B8 174 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 ZNF565Q8N9K5 539 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 TNFAIP8L1Q8WVP5 186 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 CFHR4Q92496 578 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 JAM3Q9BX67 310 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 BARHL1Q9BZE3 327 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 FAM192AQ9GZU8 254 aa12.66□□□□□ -0.38
CLDN11-204ENST00000477531 CHCHD3Q9NX63 227 aaKnown RBP12.66□□□□□ -0.38
CLDN11-204ENST00000477531 MEGF11A6BM72 1044 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 ZNF729A6NN14 1252 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-204ENST00000477531 H0YJX3 145 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 LIMS3P0CW19 117 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 LIMS4P0CW20 117 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 GTF2A1P52655 376 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-204ENST00000477531 PPP3R1P63098 170 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 EMX1Q04741 257 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-204ENST00000477531 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-204ENST00000477531 PAN3Q58A45 887 aaKnown RBP12.65□□□□□ -0.38
CLDN11-204ENST00000477531 TTC23Q5W5X9 447 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 ELP2Q6IA86 826 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 OR4P4Q8NGL7 312 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 APH1BQ8WW43 257 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 S100A13Q99584 98 aa12.65□□□□□ -0.38
CLDN11-204ENST00000477531 EXOSC1Q9Y3B2 195 aaKnown RBP12.65□□□□□ -0.38
CLDN11-204ENST00000477531 HSPB6O14558 160 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 WBP4O75554 376 aaKnown RBP12.64□□□□□ -0.39
CLDN11-204ENST00000477531 CD34P28906 385 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 C21orf33P30042 268 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-204ENST00000477531 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-204ENST00000477531 HABP2Q14520 560 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-204ENST00000477531 IL13RA2Q14627 380 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 CDK5R1Q15078 307 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 SMN1Q16637 294 aaKnown RBP12.64□□□□□ -0.39
CLDN11-204ENST00000477531 NSUN5P1Q3KNT7 163 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 CCDC144NLQ6NUI1 221 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 C16orf82Q7Z2V1 217 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 SETD9Q8NE22 299 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 COQ2Q96H96 371 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 C8orf4Q9NR00 106 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 SERTAD4Q9NUC0 356 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 TAS2R4Q9NYW5 299 aa12.64□□□□□ -0.39
CLDN11-204ENST00000477531 MEIKINA0A087WXM9 373 aa12.63□□□□□ -0.39
CLDN11-204ENST00000477531 KBTBD11-OT1A0A1B0GTJ5 212 aa12.63□□□□□ -0.39
CLDN11-204ENST00000477531 FAM172BPA6NC97 362 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms