RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ODAMA1E959 279 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 FUOMA2VDF0 154 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 CCDC182A6NF36 153 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 MAGEB4O15481 346 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-213ENST00000476777 OR2H2O95918 312 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 IGKV1D-33P01593 117 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 IGKV1-33P01594 117 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 ELANEP08246 267 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 HCKP08631 526 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 ATP6V1B2P21281 511 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 SNU13P55769 128 aaKnown RBP8.87□□□□□ -0.99
BRCA1-213ENST00000476777 CDK5Q00535 292 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 SPIN3Q5JUX0 258 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 ZNF322Q6U7Q0 402 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-213ENST00000476777 PGAM4Q8N0Y7 254 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 OR9G1Q8NH87 305 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 GIPC3Q8TF64 312 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 COQ2Q96H96 371 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 KIRREL1Q96J84 757 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 CHST5Q9GZS9 411 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 CCDC134Q9H6E4 229 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 SNX5Q9Y5X3 404 aa8.87□□□□□ -0.99
BRCA1-213ENST00000476777 TCRBV5S2A0A599 114 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 H3BSH0 61 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 J3QR06 171 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 SH2D1BO14796 132 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 GATBO75879 557 aaKnown RBP8.86□□□□□ -0.99
BRCA1-213ENST00000476777 IGHV3-7P01780 117 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 PRKACAP17612 351 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 NFYBP25208 207 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 CXCR4P61073 352 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 CFHR3Q02985 330 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 MADCAM1Q13477 382 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 FAM27D1Q5T7N8 215 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 C16orf89Q6UX73 402 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 OR11H1Q8NG94 326 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 ISOC1Q96CN7 298 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 RNFT2Q96EX2 444 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 BORCS8Q96FH0 119 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 HRASLS5Q96KN8 279 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 TM2D3Q9BRN9 247 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 GON7Q9BXV9 100 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 ABCG5Q9H222 651 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 MAGIXQ9H6Y5 334 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 PLEKHA1Q9HB21 404 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 EXOSC4Q9NPD3 245 aaKnown RBP8.86□□□□□ -0.99
BRCA1-213ENST00000476777 ACTR3BQ9P1U1 418 aa8.86□□□□□ -0.99
BRCA1-213ENST00000476777 MRM2Q9UI43 246 aaKnown RBP8.86□□□□□ -0.99
BRCA1-213ENST00000476777 AMMECR1Q9Y4X0 333 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-213ENST00000476777 KBTBD11-OT1A0A1B0GTJ5 212 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 ZNF729A6NN14 1252 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-213ENST00000476777 SASH3O75995 380 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 CSN2P05814 226 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 CGB3P0DN86 165 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 CGB7P0DN87 165 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 POU3F4P49335 361 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 VEGFCP49767 419 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 RAB7AP51149 207 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 EBI3Q14213 229 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 ODF4Q2M2E3 257 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 SPATS1Q496A3 300 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 KRBOX4Q5JUW0 171 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 ASPHD1Q5U4P2 390 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 ZNF429Q86V71 674 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 TGIF2LXQ8IUE1 241 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 OR8H3Q8N146 312 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 LEAP2Q969E1 77 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 CNN2Q99439 309 aaKnown RBP8.85□□□□□ -0.99
BRCA1-213ENST00000476777 HMG20AQ9NP66 347 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 LIN7CQ9NUP9 197 aaKnown RBP8.85□□□□□ -0.99
BRCA1-213ENST00000476777 ING3Q9NXR8 418 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 PSG11Q9UQ72 335 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 GSTK1Q9Y2Q3 226 aa8.85□□□□□ -0.99
BRCA1-213ENST00000476777 TRIM64CA6NLI5 447 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 NCBP2LA6PVI3 153 aaKnown RBP8.84□□□□□ -0.99
BRCA1-213ENST00000476777 SYT7O43581 403 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 CYB5AP00167 134 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 IGHG4P01861 327 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 OR8U8P0C7N1 319 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 OSMP13725 252 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 SPNP16150 400 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 PSMB8P28062 276 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 ATP1B3P54709 279 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 ACTR3P61158 418 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 GK3PQ14409 553 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 TMEM236Q5W0B7 351 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 TMEM179BQ7Z7N9 219 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 Q8N6K4 173 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 Q8N9W7 124 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 DNAAF1Q8NEP3 725 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 OR1N2Q8NGR9 330 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 MYOZ3Q8TDC0 251 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 HAVCR2Q8TDQ0 301 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 EAF1Q96JC9 268 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-213ENST00000476777 COMMD4Q9H0A8 199 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 PPIL3Q9H2H8 161 aaKnown RBP8.84□□□□□ -0.99
BRCA1-213ENST00000476777 ISYNA1Q9NPH2 558 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 OR6C3Q9NZP0 311 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 HERC2O95714 4834 aa8.84□□□□□ -0.99
BRCA1-213ENST00000476777 ALMS1Q8TCU4 4167 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms