RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 SIGLEC7Q9Y286 467 aa4.34□□□□□ -1.71
NUP58-209ENST00000476553 TMEM56-RWDD3S4R434 201 aa4.34□□□□□ -1.71
NUP58-209ENST00000476553 CLUHO75153 1309 aa4.34□□□□□ -1.71
NUP58-209ENST00000476553 ARHGEF10O15013 1369 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 IGKV3D-15A0A087WSY6 115 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 PQLC2LA1A4F0 135 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 FAM172BPA6NC97 362 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 FAM183AA6NL82 134 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 PSPHP1O15172 72 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 PDCD6O75340 191 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 ATG12O94817 140 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 EPPINO95925 133 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 REG1AP05451 166 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 OR5G3P0C626 314 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 IGHV3-43DP0DP04 118 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 ESDP10768 282 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 CXCL3P19876 107 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 H2BFSP57053 126 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 TAS2R46P59540 309 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 AP1S1P61966 158 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 DYNLL1P63167 89 aaKnown RBP4.33□□□□□ -1.72
NUP58-209ENST00000476553 RGNQ15493 299 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 PRR4Q16378 134 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 NDUFA5Q16718 116 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 DEFB115Q30KQ5 88 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 ADAMTSL4-AS1Q5T5F5 129 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 TMEM236Q5W0B7 351 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 KDM4DQ6B0I6 523 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 CLEC19AQ6UXS0 136 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 LINC00173Q6ZV60 143 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 TMUB2Q71RG4 321 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 NEGR1Q7Z3B1 354 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 FAM220AQ7Z4H9 259 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 ZNF589Q86UQ0 364 aaPredicted RBP4.33□□□□□ -1.72
NUP58-209ENST00000476553 ZCCHC24Q8N2G6 241 aaKnown RBP4.33□□□□□ -1.72
NUP58-209ENST00000476553 TMEM252Q8N6L7 170 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 DCUN1D1Q96GG9 259 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 ZNF717Q9BY31 904 aaPredicted RBP4.33□□□□□ -1.72
NUP58-209ENST00000476553 EDA2RQ9HAV5 297 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 IDI2-AS1Q9NZ38 188 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 ZNF225Q9UK10 706 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 OR52A1Q9UKL2 312 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 SLC35A3Q9Y2D2 325 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
NUP58-209ENST00000476553 MYO15BQ96JP2 1530 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 NRCAMQ92823 1304 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 A0A087WWV3 80 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 OR4C46A6NHA9 309 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 D6RAR5 112 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 UPK2O00526 184 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 KPNA4O00629 521 aaPredicted RBP4.32□□□□□ -1.72
NUP58-209ENST00000476553 LYPLA1O75608 230 aaPredicted RBP4.32□□□□□ -1.72
NUP58-209ENST00000476553 ARL6IP5O75915 188 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 TRBV12-3P01733 135 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 ZSCAN5DPP0CG00 497 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 RNF224P0DH78 156 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 CXCL2P19875 107 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 PRSS3P35030 304 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 OR3A4PP47883 348 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 NCBP2P52298 156 aaKnown RBP eCLIP4.32□□□□□ -1.72
NUP58-209ENST00000476553 ZNF138P52744 262 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 PMVKQ15126 192 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 SNRNP35Q16560 246 aaKnown RBP4.32□□□□□ -1.72
NUP58-209ENST00000476553 ELP2Q6IA86 826 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 CLVS1Q8IUQ0 354 aaPredicted RBP4.32□□□□□ -1.72
NUP58-209ENST00000476553 STX19Q8N4C7 294 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 OR4S2Q8NH73 311 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 OR13C6PQ8NH95 151 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 MCFD2Q8NI22 146 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 ZNF420Q8TAQ5 688 aaPredicted RBP4.32□□□□□ -1.72
NUP58-209ENST00000476553 C11orf40Q8WZ69 217 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 SIGLEC12Q96PQ1 595 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 SFXN3Q9BWM7 321 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 RBFOX1Q9NWB1 397 aaKnown RBP4.32□□□□□ -1.72
NUP58-209ENST00000476553 HES2Q9Y543 173 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 HSPB11Q9Y547 144 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 LRRK1Q38SD2 2015 aa4.32□□□□□ -1.72
NUP58-209ENST00000476553 IGHV1-69DA0A0B4J2H0 117 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 EXOC1LA0A1B0GW35 172 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 PMS2P5A8MQ11 134 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 MANBAO00462 879 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 PI15O43692 258 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 GALR3O60755 368 aaPredicted RBP4.31□□□□□ -1.72
NUP58-209ENST00000476553 S100GP29377 79 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 SRP9P49458 86 aaKnown RBP4.31□□□□□ -1.72
NUP58-209ENST00000476553 ZNF45Q02386 682 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 CD47Q08722 323 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 C1DQ13901 141 aaKnown RBP4.31□□□□□ -1.72
NUP58-209ENST00000476553 C16orf72Q14CZ0 275 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 HERPUD1Q15011 391 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 TGIF1Q15583 401 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 NHLRC3Q5JS37 347 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 TEX36Q5VZQ5 186 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 SPATA31B1PQ5VZV4 182 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 FBXW9Q5XUX1 488 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 H2AFVQ71UI9 128 aa4.31□□□□□ -1.72
NUP58-209ENST00000476553 C6orf120Q7Z4R8 191 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms