RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 ELANEP08246 267 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 FRMD6-AS1P0C7T7 363 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 OSMP13725 252 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 GPR12P47775 334 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 POU3F4P49335 361 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 INSL3P51460 131 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 CXCR4P61073 352 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 ODF4Q2M2E3 257 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 SPATS1Q496A3 300 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 TMEM236Q5W0B7 351 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 C4orf3Q8WVX3 66 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 KIRREL1Q96J84 757 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 CHST5Q9GZS9 411 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 ING3Q9NXR8 418 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 NKX1-2Q9UD57 310 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 GSTK1Q9Y2Q3 226 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 AMMECR1Q9Y4X0 333 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 SORL1Q92673 2214 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 STARD9Q9P2P6 4700 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 ZNF729A6NN14 1252 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 J3QR06 171 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 IGHV3-7P01780 117 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 ACTR3P61158 418 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 GK3PQ14409 553 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 DEFB107AQ8IZN7 70 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 LEAP2Q969E1 77 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 COQ2Q96H96 371 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 CNN2Q99439 309 aaKnown RBP12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 GON7Q9BXV9 100 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
APOBEC3F-203ENST00000476513 KBTBD11-OT1A0A1B0GTJ5 212 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 SYT7O43581 403 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 CYB5AP00167 134 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 HCKP08631 526 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 RBP2P50120 134 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 RAB7AP51149 207 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 ATP1B3P54709 279 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 MADCAM1Q13477 382 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 FAM98BQ52LJ0 330 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 KRBOX4Q5JUW0 171 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 TMEM179BQ7Z7N9 219 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 TGIF2LXQ8IUE1 241 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 SLC35F2Q8IXU6 374 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 OR8H3Q8N146 312 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 RNFT2Q96EX2 444 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 ABCG5Q9H222 651 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 SLC25A19Q9HC21 320 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 TVP23BQ9NYZ1 205 aa12.83□□□□□ -0.36
APOBEC3F-203ENST00000476513 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 SERPINA3P01011 423 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 CSN2P05814 226 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 CGB3P0DN86 165 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 CGB7P0DN87 165 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 CFHR3Q02985 330 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 EBI3Q14213 229 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 DNAAF1Q8NEP3 725 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 ELAC2Q9BQ52 826 aaKnown RBP12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 PPIL3Q9H2H8 161 aaKnown RBP12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 EDA2RQ9HAV5 297 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 LIN7CQ9NUP9 197 aaKnown RBP12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 ARGLU1Q9NWB6 273 aaPredicted RBP12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 PSG11Q9UQ72 335 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 CSMD3Q7Z407 3707 aa12.82□□□□□ -0.36
APOBEC3F-203ENST00000476513 HYDINQ4G0P3 5121 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 IGKV1-12A0A0C4DH73 117 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 NCBP2LA6PVI3 153 aaKnown RBP12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 IGKV1D-12P01611 117 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 IGHG4P01861 327 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 ZNF44P15621 663 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 MTCP1P56278 107 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 SCN1BQ07699 218 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 ATXN7L3Q14CW9 347 aaPredicted RBP12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 ASPHD1Q5U4P2 390 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 C16orf89Q6UX73 402 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 BCDIN3DQ7Z5W3 292 aaKnown RBP12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 CATSPERDQ86XM0 798 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 Q8N9W7 124 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 HAVCR2Q8TDQ0 301 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 ISOC1Q96CN7 298 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 EAF1Q96JC9 268 aaPredicted RBP12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 MNTQ99583 582 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 TM2D3Q9BRN9 247 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 TEX12Q9BXU0 123 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 COMMD4Q9H0A8 199 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 OR6C3Q9NZP0 311 aa12.81□□□□□ -0.36
APOBEC3F-203ENST00000476513 IGKV1-9A0A0C4DH69 117 aa12.8□□□□□ -0.36
APOBEC3F-203ENST00000476513 ZNF670-ZNF695F2Z2N8 137 aa12.8□□□□□ -0.36
APOBEC3F-203ENST00000476513 ATP8B1O43520 1251 aa12.8□□□□□ -0.36
APOBEC3F-203ENST00000476513 CST1P01037 141 aa12.8□□□□□ -0.36
APOBEC3F-203ENST00000476513 SPNP16150 400 aa12.8□□□□□ -0.36
APOBEC3F-203ENST00000476513 PSMB8P28062 276 aa12.8□□□□□ -0.36
APOBEC3F-203ENST00000476513 BNIP1Q12981 228 aa12.8□□□□□ -0.36
APOBEC3F-203ENST00000476513 PDZK1IP1Q13113 114 aa12.8□□□□□ -0.36
APOBEC3F-203ENST00000476513 Q6P435 159 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms