RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MTCH1Q9NZJ7 389 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 GLS2Q9UI32 602 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 A0A1B0GUS0 222 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 BTBD17A6NE02 478 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 ANGPTL7O43827 346 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 AIREO43918 545 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 CSTBP04080 98 aaKnown RBP15.31■□□□□ 0.04
CCDC171-206ENST00000474193 SELLP14151 372 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 BMXP51813 675 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 ZP1P60852 638 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 SHISA2Q6UWI4 295 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 LRRTM1Q86UE6 522 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 BATF2Q8N1L9 274 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 PXT1Q8NFP0 134 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 OR13F1Q8NGS4 319 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 EMG1Q92979 244 aaKnown RBP15.31■□□□□ 0.04
CCDC171-206ENST00000474193 YIPF6Q96EC8 236 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 SIRT7Q9NRC8 400 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 OR14J1Q9UGF5 321 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 MRPS28Q9Y2Q9 187 aaKnown RBP15.31■□□□□ 0.04
CCDC171-206ENST00000474193 MAB21L2Q9Y586 359 aa15.31■□□□□ 0.04
CCDC171-206ENST00000474193 ZNF780AO75290 641 aaPredicted RBP15.3■□□□□ 0.04
CCDC171-206ENST00000474193 KDM4BO94953 1096 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 PAHP00439 452 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 MELTFP08582 738 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 FBP1P09467 338 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 BCL3P20749 454 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 RPL5P46777 297 aaKnown RBP15.3■□□□□ 0.04
CCDC171-206ENST00000474193 OR3A4PP47883 348 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 GPR176Q14439 515 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 AWAT2Q6E213 333 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 RNF144BQ7Z419 303 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 FAM58AQ8N1B3 248 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 ZNF747Q9BV97 191 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 PLGRKTQ9HBL7 147 aa15.3■□□□□ 0.04
CCDC171-206ENST00000474193 AK6Q9Y3D8 172 aaKnown RBP15.3■□□□□ 0.04
CCDC171-206ENST00000474193 KNG1P01042 644 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 TFF1P04155 84 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 TFAP2AP05549 437 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 PRKACAP17612 351 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 RPL15P61313 204 aaKnown RBP15.29■□□□□ 0.04
CCDC171-206ENST00000474193 ERVK11-1P61568 191 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 RPL31P62899 125 aaKnown RBP15.29■□□□□ 0.04
CCDC171-206ENST00000474193 TPRA1Q86W33 373 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 FUNDC2Q9BWH2 189 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 FAM234AQ9H0X4 552 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 ZNF222Q9UK12 451 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 V9GY05 133 aa15.29■□□□□ 0.04
CCDC171-206ENST00000474193 A0A0U1RQK1 487 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 FAM181BA6NEQ2 426 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 NPFFO15130 113 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 CDRT1O95170 752 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 HTR3BO95264 441 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 CHRM2P08172 466 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 RAB3BP20337 219 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 HTR2CP28335 458 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 NPBWR2P48146 333 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 MTNR1BP49286 362 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 UBE2E1P51965 193 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 GLIPR1L1Q6UWM5 242 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 OR6M1Q8NGM8 313 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 OR4F5Q8NH21 305 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 DYRK2Q92630 601 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 NKX3-1Q99801 234 aaPredicted RBP15.28■□□□□ 0.04
CCDC171-206ENST00000474193 HEXA-AS1Q9H8Q6 139 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 UNKLQ9H9P5 680 aaKnown RBP15.28■□□□□ 0.04
CCDC171-206ENST00000474193 BEX1Q9HBH7 125 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 HES4Q9HCC6 221 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 RBFOX1Q9NWB1 397 aaKnown RBP15.28■□□□□ 0.04
CCDC171-206ENST00000474193 GHRLQ9UBU3 117 aa15.28■□□□□ 0.04
CCDC171-206ENST00000474193 IGKV1-12A0A0C4DH73 117 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 IGKV1D-12P01611 117 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 UBBP0CG47 229 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 ALDH3B2P48448 385 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 SLC22A6Q4U2R8 563 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 SPIN3Q5JUX0 258 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 CRIP3Q6Q6R5 217 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 ASCL4Q6XD76 172 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 CD177Q8N6Q3 437 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 Q8N7P7 452 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 ASCC1Q8N9N2 400 aaKnown RBP15.27■□□□□ 0.04
CCDC171-206ENST00000474193 CENPOQ9BU64 300 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 CHIAQ9BZP6 476 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 HMG20AQ9NP66 347 aa15.27■□□□□ 0.04
CCDC171-206ENST00000474193 A0A1W2PRD5 423 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 A0A1W2PRF3 423 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 A0A1W2PRM7 423 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 MEIOCA2RUB1 952 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 F8VVB4 439 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 F8VWA3 439 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 RNASEK-C17orf49H0YIS7 233 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 SH2D1BO14796 132 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 TK1P04183 234 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 CALCBP10092 127 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 GTF2F2P13984 249 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 SERPINA2P20848 420 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 SNU13P55769 128 aaKnown RBP15.26■□□□□ 0.03
CCDC171-206ENST00000474193 LSM3P62310 102 aaKnown RBP15.26■□□□□ 0.03
CCDC171-206ENST00000474193 RAB11BQ15907 218 aa15.26■□□□□ 0.03
CCDC171-206ENST00000474193 C1orf100Q5SVJ3 147 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms