RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 NDUFB7P17568 137 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 SDC2P34741 201 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 ZNF93P35789 620 aaPredicted RBP10.78□□□□□ -0.68
TPM3-216ENST00000473036 SRP14P37108 136 aaKnown RBP10.78□□□□□ -0.68
TPM3-216ENST00000473036 PTGFRP43088 359 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 BMXP51813 675 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 ERVFRD-1P60508 538 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 VBP1P61758 197 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 LSM3P62310 102 aaKnown RBP10.78□□□□□ -0.68
TPM3-216ENST00000473036 GPR176Q14439 515 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 CD276Q5ZPR3 534 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 METAP1DQ6UB28 335 aaPredicted RBP10.78□□□□□ -0.68
TPM3-216ENST00000473036 TCF23Q7RTU1 214 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 ZNF561Q8N587 486 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 C11orf42Q8N5U0 333 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 Q8NFD4 153 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 PXT1Q8NFP0 134 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 OR4M1Q8NGD0 313 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 TNFAIP8L1Q8WVP5 186 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 ACOT12Q8WYK0 555 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 C22orf15Q8WYQ4 148 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 GPER1Q99527 375 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 DCSTAMPQ9H295 470 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 CNTD2Q9H8S5 307 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 SEBOXQ9HB31 216 aaPredicted RBP10.78□□□□□ -0.68
TPM3-216ENST00000473036 ZNF69Q9UC07 566 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 MEX3AA1L020 520 aaKnown RBP10.77□□□□□ -0.69
TPM3-216ENST00000473036 H3BUI4 141 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 MAS1P04201 325 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 PPIAL4GP0DN37 164 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 CD37P11049 281 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 CFPP27918 469 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 OR3A1P47881 315 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 COMPP49747 757 aaPredicted RBP10.77□□□□□ -0.69
TPM3-216ENST00000473036 ZNF273Q14593 569 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 C11orf91Q3C1V1 193 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 TMEM200BQ69YZ2 307 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 ELP2Q6IA86 826 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 BTNL3Q6UXE8 466 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 Q8IYB0 196 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 OR4S1Q8NGB4 309 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 OR4D6Q8NGJ1 314 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 OR6M1Q8NGM8 313 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 H1FXQ92522 213 aaKnown RBP10.77□□□□□ -0.69
TPM3-216ENST00000473036 SLC25A46Q96AG3 418 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 ZNF48Q96MX3 618 aaPredicted RBP10.77□□□□□ -0.69
TPM3-216ENST00000473036 WDFY2Q96P53 400 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 CHST6Q9GZX3 395 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 TRRAPQ9Y4A5 3859 aa10.77□□□□□ -0.69
TPM3-216ENST00000473036 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 SHISA3A0PJX4 238 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 AIPO00170 330 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 SIRPB1O00241 398 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 GPR37O15354 613 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 BPNT1O95861 308 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 OR2H2O95918 312 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 CHRM2P08172 466 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 ZNF182P17025 639 aaPredicted RBP10.76□□□□□ -0.69
TPM3-216ENST00000473036 EPHA1P21709 976 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 LMO1P25800 156 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 DLX6P56179 175 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 NCS1P62166 190 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 PIGYQ3MUY2 71 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 C1orf100Q5SVJ3 147 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 RUSC1-AS1Q66K80 236 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 HCP5Q6MZN7 132 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 MZT2AQ6P582 158 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 JAGN1Q8N5M9 183 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 TPRX1Q8N7U7 411 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 OR51T1Q8NGJ9 327 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 NANPQ8TBE9 248 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 TNFRSF14Q92956 283 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 SLC6A7Q99884 636 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 PCGF1Q9BSM1 259 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 PLGRKTQ9HBL7 147 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 ABRACLQ9P1F3 81 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 A3GALT2U3KPV4 340 aa10.76□□□□□ -0.69
TPM3-216ENST00000473036 TRAV24A0A0B4J272 114 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 TRAV40A0A0B4J280 105 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 A0A0G2JK05 382 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 IFITM5A6NNB3 132 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 SLC33A1O00400 549 aaPredicted RBP10.75□□□□□ -0.69
TPM3-216ENST00000473036 SLC17A2O00624 439 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 TOX4O94842 621 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 LIPFP07098 398 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 CCL3L1P16619 93 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 HTR2CP28335 458 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 RPS19P39019 145 aaKnown RBP10.75□□□□□ -0.69
TPM3-216ENST00000473036 SPIN3Q5JUX0 258 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 BRD3OSQ6XYD6 125 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 PDZD9Q8IXQ8 264 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 OR8H2Q8N162 312 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 ASCC1Q8N9N2 400 aaKnown RBP10.75□□□□□ -0.69
TPM3-216ENST00000473036 MRPS24Q96EL2 167 aaKnown RBP10.75□□□□□ -0.69
TPM3-216ENST00000473036 SNX22Q96L94 193 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 CMTM3Q96MX0 182 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 NAA50Q9GZZ1 169 aaKnown RBP10.75□□□□□ -0.69
TPM3-216ENST00000473036 FAM234AQ9H0X4 552 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 ESM1Q9NQ30 184 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms