RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 EMP2P54851 167 aa8.8□□□□□ -1
APTX-216ENST00000472896 RAB38P57729 211 aa8.8□□□□□ -1
APTX-216ENST00000472896 RAP1BP61224 184 aa8.8□□□□□ -1
APTX-216ENST00000472896 MRPS11P82912 194 aaKnown RBP8.8□□□□□ -1
APTX-216ENST00000472896 ZNF266Q14584 549 aa8.8□□□□□ -1
APTX-216ENST00000472896 IL11RAQ14626 422 aa8.8□□□□□ -1
APTX-216ENST00000472896 ICAM4Q14773 271 aa8.8□□□□□ -1
APTX-216ENST00000472896 PCK2Q16822 640 aa8.8□□□□□ -1
APTX-216ENST00000472896 SP5Q6BEB4 398 aaPredicted RBP8.8□□□□□ -1
APTX-216ENST00000472896 SPSB3Q6PJ21 355 aa8.8□□□□□ -1
APTX-216ENST00000472896 RNF44Q7L0R7 432 aa8.8□□□□□ -1
APTX-216ENST00000472896 TGIF2LYQ8IUE0 185 aa8.8□□□□□ -1
APTX-216ENST00000472896 KIR2DL5AQ8N109 375 aa8.8□□□□□ -1
APTX-216ENST00000472896 TMEM156Q8N614 296 aa8.8□□□□□ -1
APTX-216ENST00000472896 SLC35G3Q8N808 338 aa8.8□□□□□ -1
APTX-216ENST00000472896 NAXEQ8NCW5 288 aa8.8□□□□□ -1
APTX-216ENST00000472896 OR10A7Q8NGE5 316 aa8.8□□□□□ -1
APTX-216ENST00000472896 OR52N5Q8NH56 324 aa8.8□□□□□ -1
APTX-216ENST00000472896 SNX22Q96L94 193 aa8.8□□□□□ -1
APTX-216ENST00000472896 MMP25Q9NPA2 562 aa8.8□□□□□ -1
APTX-216ENST00000472896 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.8□□□□□ -1
APTX-216ENST00000472896 PRR13Q9NZ81 148 aa8.8□□□□□ -1
APTX-216ENST00000472896 LRFN1Q9P244 771 aa8.8□□□□□ -1
APTX-216ENST00000472896 B9D1Q9UPM9 204 aa8.8□□□□□ -1
APTX-216ENST00000472896 WSB1Q9Y6I7 421 aa8.8□□□□□ -1
APTX-216ENST00000472896 URGCP-MRPS24S4R325 110 aa8.8□□□□□ -1
APTX-216ENST00000472896 PRRC2CQ9Y520 2896 aaKnown RBP8.8□□□□□ -1
APTX-216ENST00000472896 F8P00451 2351 aa8.8□□□□□ -1
APTX-216ENST00000472896 SERINC4A6NH21 518 aa8.79□□□□□ -1
APTX-216ENST00000472896 H0YL77 283 aa8.79□□□□□ -1
APTX-216ENST00000472896 XKRYO14609 159 aa8.79□□□□□ -1
APTX-216ENST00000472896 CDC14BO60729 498 aa8.79□□□□□ -1
APTX-216ENST00000472896 GLRA1P23415 457 aa8.79□□□□□ -1
APTX-216ENST00000472896 APLNRP35414 380 aa8.79□□□□□ -1
APTX-216ENST00000472896 FHITP49789 147 aa8.79□□□□□ -1
APTX-216ENST00000472896 RPL18Q07020 188 aaKnown RBP8.79□□□□□ -1
APTX-216ENST00000472896 FAM69BQ5VUD6 431 aa8.79□□□□□ -1
APTX-216ENST00000472896 C1orf140Q5VVS0 124 aa8.79□□□□□ -1
APTX-216ENST00000472896 RTL6Q6ICC9 239 aa8.79□□□□□ -1
APTX-216ENST00000472896 DEGS2Q6QHC5 323 aa8.79□□□□□ -1
APTX-216ENST00000472896 PLXDC2Q6UX71 529 aa8.79□□□□□ -1
APTX-216ENST00000472896 TMEM182Q6ZP80 229 aaPredicted RBP8.79□□□□□ -1
APTX-216ENST00000472896 VN1R4Q7Z5H5 301 aa8.79□□□□□ -1
APTX-216ENST00000472896 ATG4DQ86TL0 474 aaPredicted RBP8.79□□□□□ -1
APTX-216ENST00000472896 LSRQ86X29 649 aaPredicted RBP8.79□□□□□ -1
APTX-216ENST00000472896 CISD2Q8N5K1 135 aaKnown RBP8.79□□□□□ -1
APTX-216ENST00000472896 FDCSPQ8NFU4 85 aa8.79□□□□□ -1
APTX-216ENST00000472896 TM4SF19Q96DZ7 209 aa8.79□□□□□ -1
APTX-216ENST00000472896 LPAR4Q99677 370 aa8.79□□□□□ -1
APTX-216ENST00000472896 NKX3-1Q99801 234 aaPredicted RBP8.79□□□□□ -1
APTX-216ENST00000472896 SYT3Q9BQG1 590 aa8.79□□□□□ -1
APTX-216ENST00000472896 LRP12Q9Y561 859 aa8.79□□□□□ -1
APTX-216ENST00000472896 NSG1A0A0A6YYJ2 146 aa8.78□□□□□ -1
APTX-216ENST00000472896 C2orf72A6NCS6 295 aa8.78□□□□□ -1
APTX-216ENST00000472896 LILRA5A6NI73 299 aa8.78□□□□□ -1
APTX-216ENST00000472896 CRYM-AS1A6NIL9 109 aa8.78□□□□□ -1
APTX-216ENST00000472896 C21orf140B9A014 251 aa8.78□□□□□ -1
APTX-216ENST00000472896 H7C1C5 153 aa8.78□□□□□ -1
APTX-216ENST00000472896 HSPA12AO43301 675 aa8.78□□□□□ -1
APTX-216ENST00000472896 CA11O75493 328 aa8.78□□□□□ -1
APTX-216ENST00000472896 HLA-DQA2P01906 255 aa8.78□□□□□ -1
APTX-216ENST00000472896 MBPP02686 304 aaPredicted RBP8.78□□□□□ -1
APTX-216ENST00000472896 EDN3P14138 238 aa8.78□□□□□ -1
APTX-216ENST00000472896 PTGER4P35408 488 aa8.78□□□□□ -1
APTX-216ENST00000472896 OR3A1P47881 315 aa8.78□□□□□ -1
APTX-216ENST00000472896 CSNK1A1P48729 337 aa8.78□□□□□ -1
APTX-216ENST00000472896 LCN6P62502 163 aa8.78□□□□□ -1
APTX-216ENST00000472896 PAX5Q02548 391 aa8.78□□□□□ -1
APTX-216ENST00000472896 EXOSC7Q15024 291 aaKnown RBP8.78□□□□□ -1
APTX-216ENST00000472896 ARL6IP1Q15041 203 aa8.78□□□□□ -1
APTX-216ENST00000472896 THNSL2Q86YJ6 484 aa8.78□□□□□ -1
APTX-216ENST00000472896 OR4X1Q8NH49 305 aa8.78□□□□□ -1
APTX-216ENST00000472896 KCNG3Q8TAE7 436 aa8.78□□□□□ -1
APTX-216ENST00000472896 PPP1R14AQ96A00 147 aa8.78□□□□□ -1
APTX-216ENST00000472896 ARSGQ96EG1 525 aa8.78□□□□□ -1
APTX-216ENST00000472896 PYGO2Q9BRQ0 406 aa8.78□□□□□ -1
APTX-216ENST00000472896 TIMM29Q9BSF4 260 aa8.78□□□□□ -1
APTX-216ENST00000472896 ABHD6Q9BV23 337 aa8.78□□□□□ -1
APTX-216ENST00000472896 LPAR5Q9H1C0 372 aa8.78□□□□□ -1
APTX-216ENST00000472896 G6PC2Q9NQR9 355 aa8.78□□□□□ -1
APTX-216ENST00000472896 PDZD2O15018 2839 aa8.78□□□□□ -1
APTX-216ENST00000472896 KIR2DS5A0A0G2JLQ3 304 aa8.78□□□□□ -1
APTX-216ENST00000472896 A0A0G2JNG1 304 aa8.78□□□□□ -1
APTX-216ENST00000472896 A0A1B0GU03 582 aa8.78□□□□□ -1
APTX-216ENST00000472896 KIR2DS3K7RE56 304 aa8.78□□□□□ -1
APTX-216ENST00000472896 CST2P09228 141 aa8.78□□□□□ -1
APTX-216ENST00000472896 PEBP1P30086 187 aaKnown RBP8.78□□□□□ -1
APTX-216ENST00000472896 RPS27P42677 84 aaKnown RBP8.78□□□□□ -1
APTX-216ENST00000472896 PPP1CAP62136 330 aa8.78□□□□□ -1
APTX-216ENST00000472896 HSF1Q00613 529 aa8.78□□□□□ -1
APTX-216ENST00000472896 PSG6Q00889 435 aa8.78□□□□□ -1
APTX-216ENST00000472896 PRDX4Q13162 271 aa8.78□□□□□ -1
APTX-216ENST00000472896 SSPNQ14714 243 aa8.78□□□□□ -1
APTX-216ENST00000472896 KIR2DS5Q14953 304 aa8.78□□□□□ -1
APTX-216ENST00000472896 HERPUD1Q15011 391 aa8.78□□□□□ -1
APTX-216ENST00000472896 LCN10Q6JVE6 187 aa8.78□□□□□ -1
APTX-216ENST00000472896 LRTM2Q8N967 370 aa8.78□□□□□ -1
APTX-216ENST00000472896 SLC26A10Q8NG04 563 aa8.78□□□□□ -1
APTX-216ENST00000472896 OR52R1Q8NGF1 315 aa8.78□□□□□ -1
APTX-216ENST00000472896 URM1Q9BTM9 101 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms