RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 DMXL1Q9Y485 3027 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 COL4A6Q14031 1691 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 ZBTB5O15062 677 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 SIVA1O15304 175 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 ENTPD6O75354 484 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 CTAG2O75638 210 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 TPM2P07951 284 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 GNRHRP30968 328 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 FUSP35637 526 aaKnown RBP eCLIP2.48□□□□□ -2.01
SGCE-210ENST00000472326 TUFMP49411 452 aaKnown RBP2.48□□□□□ -2.01
SGCE-210ENST00000472326 LRRC26Q2I0M4 334 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 NDUFAF7Q7L592 441 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 C9orf72Q96LT7 481 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 OPALINQ96PE5 141 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 ARV1Q9H2C2 271 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 CD209Q9NNX6 404 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 VAX2Q9UIW0 290 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 NCOR2Q9Y618 2525 aa2.48□□□□□ -2.01
SGCE-210ENST00000472326 GCN1Q92616 2671 aaKnown RBP2.47□□□□□ -2.01
SGCE-210ENST00000472326 TRAV8-6A0A0B4J262 113 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 UPK1BO75841 260 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 FOXA1P55317 472 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 Q8NDZ9 215 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 OPTNQ96CV9 577 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 STMN4Q9H169 189 aaPredicted RBP2.47□□□□□ -2.01
SGCE-210ENST00000472326 TMEM38BQ9NVV0 291 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 VPS13AQ96RL7 3174 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 A0A1W2PP64 1363 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 RTL1A6NKG5 1358 aa2.47□□□□□ -2.01
SGCE-210ENST00000472326 FAM186AA6NE01 2351 aa2.46□□□□□ -2.01
SGCE-210ENST00000472326 PLXNA3P51805 1871 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 PLXNA1Q9UIW2 1896 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 A0A0G2JMZ2 1700 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 LRRIQ4A6NIV6 560 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 PTTG1O95997 202 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 CXorf1O96002 111 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 GFAPP14136 432 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 RPS5P46782 204 aaKnown RBP2.46□□□□□ -2.02
SGCE-210ENST00000472326 ATP6V0D1P61421 351 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 CUL2Q13617 745 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 C5orf64Q2M2E5 130 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 MRPL2Q5T653 305 aaKnown RBP2.46□□□□□ -2.02
SGCE-210ENST00000472326 ZNF75AQ96N20 296 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 DEFB129Q9H1M3 183 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 ZC4H2Q9NQZ6 224 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 PXMP2Q9NR77 195 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 AHSPQ9NZD4 102 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 RABL2BQ9UNT1 228 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 USP24Q9UPU5 2620 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 RIF1Q5UIP0 2472 aaKnown RBP2.46□□□□□ -2.02
SGCE-210ENST00000472326 LAMB1P07942 1786 aa2.46□□□□□ -2.02
SGCE-210ENST00000472326 LTBP2Q14767 1821 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 USP9XQ93008 2570 aaPredicted RBP2.45□□□□□ -2.02
SGCE-210ENST00000472326 SYNGR2O43760 224 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 CD99P14209 185 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 PAFAH1B2P68402 229 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 EIF4E3Q8N5X7 224 aaKnown RBP2.45□□□□□ -2.02
SGCE-210ENST00000472326 CYB561A3Q8NBI2 242 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 ZNF649Q9BS31 505 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 UPF3BQ9BZI7 483 aaKnown RBP2.45□□□□□ -2.02
SGCE-210ENST00000472326 API5Q9BZZ5 524 aaKnown RBP2.45□□□□□ -2.02
SGCE-210ENST00000472326 AUNIPQ9H7T9 357 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 CYP3A43Q9HB55 503 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 RDH14Q9HBH5 336 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 TRIOO75962 3097 aa2.45□□□□□ -2.02
SGCE-210ENST00000472326 COL1A1P02452 1464 aaPredicted RBP2.45□□□□□ -2.02
SGCE-210ENST00000472326 EDC4Q6P2E9 1401 aaKnown RBP2.44□□□□□ -2.02
SGCE-210ENST00000472326 MAST2Q6P0Q8 1798 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 MGAMO43451 1857 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 BPTFQ12830 3046 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 IGLL5B9A064 214 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 TTC4O95801 387 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 OR8G3PP0DMU2 310 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 SFTPCP11686 197 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 IL9P15248 144 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 MTPNP58546 118 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 RPL18AQ02543 176 aaKnown RBP2.44□□□□□ -2.02
SGCE-210ENST00000472326 DNAJC3Q13217 504 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 TPBGQ13641 420 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 SLC7A5P1Q8MH63 180 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 DAW1Q8N136 415 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 ZDHHC22Q8N966 263 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 INO80EQ8NBZ0 244 aaPredicted RBP2.44□□□□□ -2.02
SGCE-210ENST00000472326 DDX19BQ9UMR2 479 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 RTL9Q8NET4 1388 aa2.44□□□□□ -2.02
SGCE-210ENST00000472326 WDR87Q6ZQQ6 2873 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 CHD7Q9P2D1 2997 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 DDX60Q8IY21 1712 aaKnown RBP2.43□□□□□ -2.02
SGCE-210ENST00000472326 CHD9Q3L8U1 2897 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 HACD1B0YJ81 288 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 WRBO00258 174 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 SLC35G6P0C7Q6 338 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 CBR1P16152 277 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 ZNF708P17019 499 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 HLA-GP17693 338 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 TEAD1P28347 426 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 SLC35A1P78382 337 aa2.43□□□□□ -2.02
SGCE-210ENST00000472326 LGALSLQ3ZCW2 172 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms