RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 Q8N402 240 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 CD177Q8N6Q3 437 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 GVQW1Q8N7I0 195 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 ASCC1Q8N9N2 400 aaKnown RBP4.38□□□□□ -1.71
ITGA6-208ENST00000469534 SPERTQ8NA61 448 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 ZSCAN4Q8NAM6 433 aaPredicted RBP4.38□□□□□ -1.71
ITGA6-208ENST00000469534 SUMF2Q8NBJ7 301 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 PXT1Q8NFP0 134 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 OR4S1Q8NGB4 309 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 OR56B1Q8NGI3 324 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 PLPPR1Q8TBJ4 325 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 RAB40AQ8WXH6 277 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 CREB3L1Q96BA8 519 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 RAB3CQ96E17 227 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 EAF1Q96JC9 268 aaPredicted RBP4.38□□□□□ -1.71
ITGA6-208ENST00000469534 NEDD4LQ96PU5 975 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 CCL13Q99616 98 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 CCL19Q99731 98 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 SOSTQ9BQB4 213 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 NRIP2Q9BQI9 281 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 DCTN5Q9BTE1 182 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 EGLN1Q9GZT9 426 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 CHMP1AQ9HD42 196 aaPredicted RBP4.38□□□□□ -1.71
ITGA6-208ENST00000469534 TMEM106BQ9NUM4 274 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 ZNF701Q9NV72 531 aaPredicted RBP4.38□□□□□ -1.71
ITGA6-208ENST00000469534 PLEKHJ1Q9NW61 149 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 GFOD1Q9NXC2 390 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 NLKQ9UBE8 527 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 RNF7Q9UBF6 113 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 KLK11Q9UBX7 282 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 IL19Q9UHD0 177 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 ZDHHC8Q9ULC8 765 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 PLEKHA6Q9Y2H5 1048 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 POLDIP2Q9Y2S7 368 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 KCNK7Q9Y2U2 307 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 NOP16Q9Y3C1 178 aaKnown RBP4.38□□□□□ -1.71
ITGA6-208ENST00000469534 WIPI2Q9Y4P8 454 aa4.38□□□□□ -1.71
ITGA6-208ENST00000469534 CHD6Q8TD26 2715 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 hCG_2014768A0A024R1R8 64 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 IGKV1D-17A0A075B6S4 117 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 IGKV1D-8A0A087WSZ0 117 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 TRAV24A0A0B4J272 114 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 CLEC18AA5D8T8 446 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 FOXI3A8MTJ6 420 aaPredicted RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 SRRM5B3KS81 715 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 MFNGO00587 321 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 SHOXO15266 292 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PPIHO43447 177 aaKnown RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PDCD6O75340 191 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 UPK1BO75841 260 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PMP2P02689 132 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 CD55P08174 381 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PSG2P11465 335 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 HIST1H1DP16402 221 aaKnown RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 AMY2BP19961 511 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 HLA-DMAP28067 261 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 CHATP28329 748 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PRSS3P35030 304 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 ETV6P41212 452 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PPOXP50336 477 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PPP5CP53041 499 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 ERVK11-1P61568 191 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 ZNF45Q02386 682 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PRB3Q04118 309 aaPredicted RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 MZT1Q08AG7 82 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 DYNC1I2Q13409 638 aaKnown RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 DCTN2Q13561 401 aaKnown RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 GPR176Q14439 515 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 TESK1Q15569 626 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 LTC4SQ16873 150 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 FAM76BQ5HYJ3 339 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 STEAP3Q658P3 488 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 FAM53AQ6NSI3 398 aaPredicted RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 Q6P435 159 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 CLEC18BQ6UXF7 455 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 FAM90A1Q86YD7 464 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 LYSMD2Q8IV50 215 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 SAXO1Q8IYX7 474 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PRR18Q8N4B5 295 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 FAM216BQ8N7L0 139 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 POC5Q8NA72 575 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 CLEC18CQ8NCF0 446 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 ZNRF1Q8ND25 227 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 TMEM185AQ8NFB2 350 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 OR4K15Q8NH41 348 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 BORCS5Q969J3 196 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PERPQ96FX8 193 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 CMSS1Q9BQ75 279 aaKnown RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 THAP7Q9BT49 309 aaPredicted RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 MRI1Q9BV20 369 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 ST6GALNAC5Q9BVH7 336 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 DPCDQ9BVM2 203 aaPredicted RBP4.37□□□□□ -1.71
ITGA6-208ENST00000469534 TM2D1Q9BX74 207 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 RAB1BQ9H0U4 201 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 TLNRD1Q9H1K6 362 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 MS4A5Q9H3V2 200 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 PLEKHF2Q9H8W4 249 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 IFT46Q9NQC8 304 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 AP5S1Q9NUS5 200 aa4.37□□□□□ -1.71
ITGA6-208ENST00000469534 FAIMQ9NVQ4 179 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms