RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 BCDIN3DQ7Z5W3 292 aaKnown RBP9.54□□□□□ -0.88
UBR4-211ENST00000467272 TRAPPC6BQ86SZ2 158 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 SBSPONQ8IVN8 264 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 SLC35F2Q8IXU6 374 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 PRSS35Q8N3Z0 413 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 DRAM1Q8N682 238 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 CCDC54Q8NEL0 328 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 OR8U1Q8NH10 309 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 OR56B4Q8NH76 319 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 OR9G1Q8NH87 305 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 NCOR1P1Q9H4R4 102 aa9.54□□□□□ -0.88
UBR4-211ENST00000467272 FRAS1Q86XX4 4008 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 ZNF729A6NN14 1252 aaPredicted RBP9.53□□□□□ -0.88
UBR4-211ENST00000467272 NUDT19A8MXV4 375 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 NPIPB11E5RHQ5 1161 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 J3QR06 171 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 SIRPB1O00241 398 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 INMTO95050 263 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 PTGFRP43088 359 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 RBP2P50120 134 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 CRISP1P54107 249 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 ACTR3P61158 418 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 PAX5Q02548 391 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 PDZK1IP1Q13113 114 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 FOXE3Q13461 319 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 KIAA0141Q14154 515 aaPredicted RBP9.53□□□□□ -0.88
UBR4-211ENST00000467272 PNLIPRP3Q17RR3 467 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 TEX38Q6PEX7 206 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 UTS2BQ765I0 119 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 SLC35E3Q7Z769 313 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 OR5M8Q8NGP6 311 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 PP6455Q8WZ26 134 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 BORCS8Q96FH0 119 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 RCHY1Q96PM5 261 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 PLSCR3Q9NRY6 295 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 TVP23BQ9NYZ1 205 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 ZNF580Q9UK33 172 aa9.53□□□□□ -0.88
UBR4-211ENST00000467272 ZNF256Q9Y2P7 627 aaPredicted RBP9.53□□□□□ -0.88
UBR4-211ENST00000467272 SLC33A1O00400 549 aaPredicted RBP9.52□□□□□ -0.89
UBR4-211ENST00000467272 TOR1AO14656 332 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 SH2D1BO14796 132 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 SYT7O43581 403 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 CALCBP10092 127 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 ANXA8P13928 327 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 PRKACAP17612 351 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 ECI1P42126 302 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 GPR12P47775 334 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 SLC35B1P78383 322 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 CDK5R1Q15078 307 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 ASPHD1Q5U4P2 390 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 NXNL2Q5VZ03 156 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 FAHD1Q6P587 224 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 LCNL1Q6ZST4 164 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 TGIF2LXQ8IUE1 241 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 CHST4Q8NCG5 386 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 Q8NFD4 153 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 ASB9Q96DX5 294 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 ADAT3Q96EY9 351 aaPredicted RBP9.52□□□□□ -0.89
UBR4-211ENST00000467272 ABCG5Q9H222 651 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 PPIL3Q9H2H8 161 aaKnown RBP9.52□□□□□ -0.89
UBR4-211ENST00000467272 RHOFQ9HBH0 211 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 GTF2A1LQ9UNN4 478 aa9.52□□□□□ -0.89
UBR4-211ENST00000467272 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 FUOMA2VDF0 154 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 SEC14L6B5MCN3 397 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 AP4M1O00189 453 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 SULT1C4O75897 302 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 IGHG4P01861 327 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 MT-ND2P03891 347 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 ELANEP08246 267 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 LYL1P12980 280 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 TMEM11P17152 192 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 PSMB8P28062 276 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 KIR3DL2P43630 455 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 RAB7AP51149 207 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 ATP1B3P54709 279 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 KPNB1Q14974 876 aaKnown RBP9.51□□□□□ -0.89
UBR4-211ENST00000467272 PTGES3Q15185 160 aaKnown RBP9.51□□□□□ -0.89
UBR4-211ENST00000467272 ODF4Q2M2E3 257 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 KIAA2026Q5HYC2 2103 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 SLC16A12Q6ZSM3 486 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 IZUMO1Q8IYV9 350 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 OR8H3Q8N146 312 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 Q8N9W7 124 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 TMEM104Q8NE00 496 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 OR4D6Q8NGJ1 314 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 OR51T1Q8NGJ9 327 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 CANT1Q8WVQ1 401 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 C4orf3Q8WVX3 66 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 TOMM40LQ969M1 308 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 RPEQ96AT9 228 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 CITED4Q96RK1 184 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 OSBPL10Q9BXB5 764 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 PLEKHA1Q9HB21 404 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 EXOSC4Q9NPD3 245 aaKnown RBP9.51□□□□□ -0.89
UBR4-211ENST00000467272 GLS2Q9UI32 602 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 PSG11Q9UQ72 335 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
UBR4-211ENST00000467272 LOC107986453A0A1B0GWG9 222 aa9.5□□□□□ -0.89
UBR4-211ENST00000467272 A0A1W2PQL4 384 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms