RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 DPM3Q9P2X0 92 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 GLS2Q9UI32 602 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 UBE2J1Q9Y385 318 aaPredicted RBP7.73□□□□□ -1.17
USP39-212ENST00000465514 TRGV10A0A0A0MS01 117 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 IGKV1-9A0A0C4DH69 117 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 FAM172BPA6NC97 362 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 SIRPB1O00241 398 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 SH2D1BO14796 132 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 RAMP3O60896 148 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 LPLP06858 475 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 ATF1P18846 271 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 CDK2P24941 298 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 BRS3P32247 399 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 ATP6V1E1P36543 226 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 BDH1Q02338 343 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 ATP6AP1Q15904 470 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 TP53I3Q53FA7 332 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 SPIN3Q5JUX0 258 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 OR52W1Q6IF63 320 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 C10orf99Q6UWK7 81 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 RTN4RL2Q86UN3 420 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 SBSPONQ8IVN8 264 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 BCAS4Q8TDM0 211 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 FGGYQ96C11 551 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 SLC7A6OSQ96CW6 309 aaPredicted RBP7.72□□□□□ -1.17
USP39-212ENST00000465514 ADAT3Q96EY9 351 aaPredicted RBP7.72□□□□□ -1.17
USP39-212ENST00000465514 RBM14Q96PK6 669 aaKnown RBP7.72□□□□□ -1.17
USP39-212ENST00000465514 SLC25A33Q9BSK2 321 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 GAL3ST2Q9H3Q3 398 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 HMG20AQ9NP66 347 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.72□□□□□ -1.17
USP39-212ENST00000465514 GNG8Q9UK08 70 aa7.72□□□□□ -1.17
USP39-212ENST00000465514 FUOMA2VDF0 154 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 SH2D7A6NKC9 451 aaPredicted RBP7.71□□□□□ -1.18
USP39-212ENST00000465514 LEUTXA8MZ59 168 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 OR2F2O95006 317 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 OR2H2O95918 312 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 IGLV1-47P01700 117 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 AMY1AP04745 511 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 AMY2AP04746 511 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 UBCP0CG48 685 aaKnown RBP7.71□□□□□ -1.18
USP39-212ENST00000465514 PRKACBP22694 351 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 POLR2IP36954 125 aaKnown RBP7.71□□□□□ -1.18
USP39-212ENST00000465514 GDNFP39905 211 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 GLIPR1P48060 266 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 ARHGDIBP52566 201 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 CDC42P60953 191 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 ISL1P61371 349 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 ZNF85Q03923 595 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 SCN1BQ07699 218 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 AESQ08117 197 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 PDZK1IP1Q13113 114 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 KPNB1Q14974 876 aaKnown RBP7.71□□□□□ -1.18
USP39-212ENST00000465514 HEPN1Q6WQI6 88 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 LHFPL2Q6ZUX7 228 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 UTS2BQ765I0 119 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 FAM220AQ7Z4H9 259 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 ZDHHC13Q8IUH4 622 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 OR4X2Q8NGF9 303 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 ZNF596Q8TC21 504 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 CORO2AQ92828 525 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 RFT1Q96AA3 541 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 ZNF649Q9BS31 505 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 GABARAPL1Q9H0R8 117 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 ZNF286AQ9HBT8 521 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 EXOSC4Q9NPD3 245 aaKnown RBP7.71□□□□□ -1.18
USP39-212ENST00000465514 TAS2R3Q9NYW6 316 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 ENOPH1Q9UHY7 261 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 HHLA2Q9UM44 414 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 GSTK1Q9Y2Q3 226 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 SORL1Q92673 2214 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 PLECQ15149 4684 aaKnown RBP7.71□□□□□ -1.18
USP39-212ENST00000465514 KIAA1109Q2LD37 5005 aa7.71□□□□□ -1.18
USP39-212ENST00000465514 IGKV1-12A0A0C4DH73 117 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 LY6LH3BQJ8 138 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 BUB1B-PAK6H3BSN5 160 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 TOR1AO14656 332 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 IGKV1D-12P01611 117 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 ZNF20P17024 532 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 CD34P28906 385 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 CEACAM3P40198 252 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 PRRX1P54821 245 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 TMED1Q13445 227 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 C9orf152Q5JTZ5 239 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 UTF1Q5T230 341 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 TPTE2P1Q5T6R2 138 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 TMEM244Q5VVB8 128 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 AMIGO2Q86SJ2 522 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 OR2G2Q8NGZ5 317 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 EME1Q96AY2 570 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 OPALINQ96PE5 141 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 SPACA5Q96QH8 159 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 CIB1Q99828 191 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 COMMD4Q9H0A8 199 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 ING3Q9NXR8 418 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 FRRS1LQ9P0K9 344 aa7.7□□□□□ -1.18
USP39-212ENST00000465514 ODAMA1E959 279 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 KDM4BO94953 1096 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 ISG15P05161 165 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 OCM2P0CE71 109 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms