RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CATSPER2Q96P56 530 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 OLFM3Q96PB7 478 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 APOL4Q9BPW4 351 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 SLC25A31Q9H0C2 315 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 ABCG5Q9H222 651 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 POMKQ9H5K3 350 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 RHOFQ9HBH0 211 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 CYB5R1Q9UHQ9 305 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 ICOSQ9Y6W8 199 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 R4GN34 69 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 TRIOBPQ9H2D6 2365 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 NUP205Q92621 2012 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 IGHV3-43A0A0B4J1X8 118 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 GOLGA8IPA6NC78 632 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 F5H5P2 479 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 LDOC1O95751 146 aaPredicted RBP2.02□□□□□ -2.09
CLK1-208ENST00000464454 HLA-AP01891 365 aaKnown RBP2.02□□□□□ -2.09
CLK1-208ENST00000464454 PRPS1L1P21108 318 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 PSMB9P28065 219 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 MAGEA3P43357 314 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 RAB25P57735 213 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 GOLGA7BQ2TAP0 167 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 PDZD11Q5EBL8 140 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 AMMECR1LQ6DCA0 310 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 DPPA2Q7Z7J5 298 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 COMTD1Q86VU5 262 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 ZFP82Q8N141 532 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 ACBD4Q8NC06 268 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 OR2M3Q8NG83 312 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 CMTM2Q8TAZ6 248 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 SUCNR1Q9BXA5 334 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 ULBP1Q9BZM6 244 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 ZNF436Q9C0F3 470 aaPredicted RBP2.02□□□□□ -2.09
CLK1-208ENST00000464454 TXNIPQ9H3M7 391 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 MAT2BQ9NZL9 334 aa2.02□□□□□ -2.09
CLK1-208ENST00000464454 SPATA31E1Q6ZUB1 1445 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 ZSWIM8A7E2V4 1837 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 CACNA1DQ01668 2161 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 SDK2Q58EX2 2172 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 TRAV8-3A0A0A6YYJ7 113 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 D6RAR5 112 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 H3BP45 60 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 I3L4J1 428 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 M0QXV9 152 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 CDIPTO14735 213 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 YKT6O15498 198 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 CRXO43186 299 aaPredicted RBP2.01□□□□□ -2.09
CLK1-208ENST00000464454 SHOX2O60902 331 aaPredicted RBP2.01□□□□□ -2.09
CLK1-208ENST00000464454 TRGV3P03979 118 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 IGKV5-2P06315 115 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 GTF2F2P13984 249 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 CNTFRP26992 372 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 HBG1P69891 147 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 HBG2P69892 147 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 CD164Q04900 197 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 BSXQ3C1V8 233 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 CEACAM21Q3KPI0 293 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 NXNL2Q5VZ03 156 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 LAMTOR1Q6IAA8 161 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 Q6ZQT7 251 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 MRPL52Q86TS9 123 aaKnown RBP2.01□□□□□ -2.09
CLK1-208ENST00000464454 LRRC6Q86X45 466 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 OTUD6BQ8N6M0 293 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 OR2AE1Q8NHA4 323 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 ACTL9Q8TC94 416 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 TMIGD2Q96BF3 282 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 OTUB2Q96DC9 234 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 LINC01587Q99440 93 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 IFT46Q9NQC8 304 aa2.01□□□□□ -2.09
CLK1-208ENST00000464454 MRM2Q9UI43 246 aaKnown RBP2.01□□□□□ -2.09
CLK1-208ENST00000464454 A0A1W2PRG6 482 aa2□□□□□ -2.09
CLK1-208ENST00000464454 ZNF729A6NN14 1252 aaPredicted RBP2□□□□□ -2.09
CLK1-208ENST00000464454 PDCD6O75340 191 aa2□□□□□ -2.09
CLK1-208ENST00000464454 PSIP1O75475 530 aaKnown RBP2□□□□□ -2.09
CLK1-208ENST00000464454 CBR3O75828 277 aa2□□□□□ -2.09
CLK1-208ENST00000464454 FADS2O95864 444 aaKnown RBP2□□□□□ -2.09
CLK1-208ENST00000464454 IGKV1D-33P01593 117 aa2□□□□□ -2.09
CLK1-208ENST00000464454 IGKV1-33P01594 117 aa2□□□□□ -2.09
CLK1-208ENST00000464454 IGHV3-53P01767 116 aa2□□□□□ -2.09
CLK1-208ENST00000464454 CBX5P45973 191 aa2□□□□□ -2.09
CLK1-208ENST00000464454 FOXA1P55317 472 aa2□□□□□ -2.09
CLK1-208ENST00000464454 TMED1Q13445 227 aa2□□□□□ -2.09
CLK1-208ENST00000464454 SLC9A3R2Q15599 337 aa2□□□□□ -2.09
CLK1-208ENST00000464454 USF2Q15853 346 aaPredicted RBP2□□□□□ -2.09
CLK1-208ENST00000464454 PYDC2Q56P42 97 aa2□□□□□ -2.09
CLK1-208ENST00000464454 ZNF470Q6ECI4 717 aa2□□□□□ -2.09
CLK1-208ENST00000464454 FAM183BPQ6ZVS7 135 aa2□□□□□ -2.09
CLK1-208ENST00000464454 AHSA2Q719I0 299 aa2□□□□□ -2.09
CLK1-208ENST00000464454 C10orf107Q8IVU9 208 aa2□□□□□ -2.09
CLK1-208ENST00000464454 BPIFB6Q8NFQ5 453 aa2□□□□□ -2.09
CLK1-208ENST00000464454 OR5P2Q8WZ92 322 aa2□□□□□ -2.09
CLK1-208ENST00000464454 PYURFQ96I23 114 aa2□□□□□ -2.09
CLK1-208ENST00000464454 GABARAPL1Q9H0R8 117 aa2□□□□□ -2.09
CLK1-208ENST00000464454 MFSD1Q9H3U5 465 aa2□□□□□ -2.09
CLK1-208ENST00000464454 DSN1Q9H410 356 aa2□□□□□ -2.09
CLK1-208ENST00000464454 CHMP5Q9NZZ3 219 aa2□□□□□ -2.09
CLK1-208ENST00000464454 POFUT2Q9Y2G5 429 aa2□□□□□ -2.09
CLK1-208ENST00000464454 NACADO15069 1562 aa2□□□□□ -2.09
CLK1-208ENST00000464454 POLR3AO14802 1390 aaPredicted RBP1.99□□□□□ -2.09
CLK1-208ENST00000464454 IGHV2-26A0A0B4J1V2 119 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms