RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NAT8Q9UHE5 227 aa6.26□□□□□ -1.41
CLSTN1-204ENST00000464286 LHFPL6Q9Y693 200 aa6.26□□□□□ -1.41
CLSTN1-204ENST00000464286 TMEM56-RWDD3S4R434 201 aa6.26□□□□□ -1.41
CLSTN1-204ENST00000464286 PRRC2BQ5JSZ5 2229 aaKnown RBP6.26□□□□□ -1.41
CLSTN1-204ENST00000464286 CACNA1CQ13936 2221 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 IGLV3-32A0A0A0MS00 114 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 KIR2DS1A0A191URI9 304 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 C3orf85A0A1B0GTC6 90 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 A0A1B0GU03 582 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 A0A1B0GV90 55 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 A0A1B0GWJ7 208 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 PRR33A8MZF0 331 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 STMND1H3BQB6 276 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 M0R143 59 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 MPPED1O15442 326 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 PHF1O43189 567 aaPredicted RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 VAMP5O95183 116 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 IGLV3-1P01715 115 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 MBP02144 154 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 TRGC2P03986 189 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 PGA4P0DJD7 388 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 BCL2P10415 239 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 CCL5P13501 91 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 DRD1P21728 446 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 VDAC1P21796 283 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 AADACP22760 399 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 UCP1P25874 307 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 PPP1CCP36873 323 aaKnown RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 SRP14P37108 136 aaKnown RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 KIR2DS4P43632 304 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 ID4P47928 161 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 EFNA3P52797 238 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 NUTF2P61970 127 aaKnown RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 RNF4P78317 190 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 FMODQ06828 376 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 PRDX4Q13162 271 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 COL9A2Q14055 689 aaPredicted RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 GAMTQ14353 236 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 KIR2DS1Q14954 304 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 DEFB110Q30KQ9 67 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 TANGO2Q6ICL3 276 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 TTLL10Q6ZVT0 673 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 TMEM252Q8N6L7 170 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 CYB561D1Q8N8Q1 229 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 ZNF441Q8N8Z8 693 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 ZFP62Q8NB50 900 aaPredicted RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 OR1P1Q8NH06 330 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 OR2V1Q8NHB1 315 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 TOMM40LQ969M1 308 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 R3HDM4Q96D70 268 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 MSI2Q96DH6 328 aaKnown RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 VWCEQ96DN2 955 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 TMEM222Q9H0R3 208 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 RIMS4Q9H426 269 aaPredicted RBP6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 CDH20Q9HBT6 801 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 WFDC1Q9HC57 220 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 ZDHHC8Q9ULC8 765 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 SLC7A11Q9UPY5 501 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 LIPGQ9Y5X9 500 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 SLCO1B1Q9Y6L6 691 aa6.25□□□□□ -1.41
CLSTN1-204ENST00000464286 SPTY2D1-AS1A0A0U1RR47 76 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 IFITM10A6NMD0 228 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 A8MWP6 167 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 TMEM250H0YL14 139 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 MASP2O00187 686 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 PHOX2AO14813 284 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 RAMP1O60894 148 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 KLF8O95600 359 aaPredicted RBP6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 LY86O95711 162 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 SEMA4FO95754 770 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 HLA-HP01893 362 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 CYC1P08574 325 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 BTF3P20290 206 aaKnown RBP6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 HOXA6P31267 233 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 IL2RGP31785 369 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 CEBPGP53567 150 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 RAB11AP62491 216 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 LCN2P80188 198 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 ERV3-1Q14264 604 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 TGIF1Q15583 401 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 NSDHLQ15738 373 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 EXT1Q16394 746 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 TMEM196Q5HYL7 178 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 SPSB3Q6PJ21 355 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 ASCL4Q6XD76 172 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 C22orf34Q6ZV56 151 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 LYZL2Q7Z4W2 148 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 KMT5CQ86Y97 462 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 SFTPA1Q8IWL2 248 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 PRR22Q8IZ63 422 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 OR5D13Q8NGL4 314 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 OR5C1Q8NGR4 320 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 MBD3L1Q8WWY6 194 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM168AQ92567 244 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 RBM14Q96PK6 669 aaKnown RBP6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 NKX3-1Q99801 234 aaPredicted RBP6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 HIST1H2BLQ99880 126 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 DDA1Q9BW61 102 aa6.24□□□□□ -1.41
CLSTN1-204ENST00000464286 PARP12Q9H0J9 701 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms