RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 DLX6P56179 175 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 EDDM3BP56851 147 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 RBM11P57052 281 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SYT6Q5T7P8 510 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GPR157Q5UAW9 335 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 USP43Q70EL4 1123 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TCF23Q7RTU1 214 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TPRX1Q8N7U7 411 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 MS4A7Q9GZW8 240 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SLITRK2Q9H156 845 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 IFT22Q9H7X7 185 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 METTL8Q9H825 291 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SIRT7Q9NRC8 400 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ZNF581Q9P0T4 197 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 A0A0A6YYJ9 748 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 IGHV1-69DA0A0B4J2H0 117 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 A0A1W2PPH5 198 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 RNASEK-C17orf49H0YIS7 233 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GEMIN2O14893 280 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TCF21O43680 179 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 IGHV1-69P01742 117 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 CCL3L1P16619 93 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 CALRP27797 417 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ERVFRD-1P60508 538 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PRB3Q04118 309 aaPredicted RBP12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 BLMHQ13867 455 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 EDDM3AQ14507 147 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 RUSC1-AS1Q66K80 236 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 AWAT2Q6E213 333 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 BRD3OSQ6XYD6 125 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 BPIFB2Q8N4F0 458 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TMEM104Q8NE00 496 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 MRPS24Q96EL2 167 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 COQ2Q96H96 371 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ZNF48Q96MX3 618 aaPredicted RBP12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PPA2Q9H2U2 334 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GHRLQ9UBU3 117 aa12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 FBN1P35555 2871 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-208ENST00000464263 hADV38S2A0JD32 116 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 MEX3AA1L020 520 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SLC22A1O15245 554 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 VENTXO95231 258 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TNFAIP8O95379 198 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GLIPR1P48060 266 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 P2RX3P56373 397 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 AESQ08117 197 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 MPV17LQ2QL34 196 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 HCP5Q6MZN7 132 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 LINC00596Q86U02 117 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PDZD9Q8IXQ8 264 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TSPAN14Q8NG11 270 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ZNF418Q8TF45 676 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 CORO2AQ92828 525 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SLC25A28Q96A46 364 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SUCNR1Q9BXA5 334 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 BANF2Q9H503 90 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 AK6Q9Y3D8 172 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 LINC00312Q9Y6C7 94 aa12.61□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TRAV1-2A0A0B4J238 106 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SHISA3A0PJX4 238 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 UBBP0CG47 229 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ZNF728P0DKX0 622 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 MGMTP16455 207 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 HTR2CP28335 458 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 QRFPP83859 136 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 KLRD1Q13241 179 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 NEDD8Q15843 81 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TAF9Q16594 264 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PAN3Q58A45 887 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SIGLECL1Q8N7X8 197 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SUMF2Q8NBJ7 301 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PRDM13Q9H4Q3 707 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ZNF696Q9H7X3 374 aa12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 UBE2J1Q9Y385 318 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-208ENST00000464263 A0A087WXM4 84 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 hCG_1809904A0A1W2PP81 198 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 A0A1W2PPE2 198 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 A0A1W2PR64 198 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 A0A1W2PRV1 198 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 FUOMA2VDF0 154 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TRIM64CA6NLI5 447 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SLC17A2O00624 439 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 HSPB6O14558 160 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 OR7C1O76099 320 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 RBP4P02753 201 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 VSIG8P0DPA2 414 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 FGF9P31371 208 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 UBE2E1P51965 193 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 HILS1P60008 231 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PAX5Q02548 391 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ATXN7L3Q14CW9 347 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 DEFB112Q30KQ8 113 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 KRBOX4Q5JUW0 171 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 NCR3LG1Q68D85 454 aa12.59□□□□□ -0.39
RAB11FIP3-208ENST00000464263 C22orf42Q6IC83 251 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms