RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 PTPRFP10586 1907 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 MYH4Q9Y623 1939 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 TRAV8-7A0A075B6U6 113 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 A0A0D9SFI3 127 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 FAM240AA0A1B0GVK7 77 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 BTNL10A8MVZ5 291 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 ZNF879B4DU55 563 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 J3QT63 122 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 OR7C2O60412 319 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 IGLV2-8P01709 118 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 OR4Q2P0C623 313 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 HLA-GP17693 338 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 PRKACBP22694 351 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 MPIP34949 423 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 MPV17P39210 176 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 HTR2BP41595 481 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 DNASE1L1P49184 302 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 RGS6P49758 472 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 DSTNP60981 165 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 DMC1Q14565 340 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 FBXL19-AS1Q494R0 122 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 FKBP1CQ5VVH2 108 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 KDM4DQ6B0I6 523 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 PRSS54Q6PEW0 395 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 DEGS2Q6QHC5 323 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 SETD3Q86TU7 594 aaPredicted RBP2.17□□□□□ -2.06
CLK1-206ENST00000461326 LRRC52Q8N7C0 313 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 TMEM105Q8N8V8 129 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 SPERTQ8NA61 448 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 OR52N1Q8NH53 320 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 LGALS14Q8TCE9 139 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 CPNE4Q96A23 557 aaPredicted RBP2.17□□□□□ -2.06
CLK1-206ENST00000461326 IP6K3Q96PC2 410 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 GABRG3Q99928 467 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 PDCD1LG2Q9BQ51 273 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 TMED9Q9BVK6 235 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 RAB1BQ9H0U4 201 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 PORCNQ9H237 461 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 LOC285556D6RIA3 1793 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 CASP8AP2Q9UKL3 1982 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 LAMA4Q16363 1823 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 MGAMO43451 1857 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 COL27A1Q8IZC6 1860 aaPredicted RBP2.16□□□□□ -2.06
CLK1-206ENST00000461326 A0A1W2PQ67 120 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 TMEM72A0PK05 275 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 GOLGA6L4A6NEF3 574 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 BOLA2-SMG1P6H3BVE0 249 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 RPL36A-HNRNPH2H7BZ11 118 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 CDRT1O95170 752 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 PTTG1O95997 202 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 LHBP01229 141 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 IL3RAP26951 378 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 OR12D2P58182 307 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 GRB2P62993 217 aaKnown RBP2.16□□□□□ -2.06
CLK1-206ENST00000461326 NDUFAF6Q330K2 333 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 TTC32Q5I0X7 151 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 LIN9Q5TKA1 542 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 RBM45Q8IUH3 476 aaKnown RBP2.16□□□□□ -2.06
CLK1-206ENST00000461326 LYPD1Q8N2G4 141 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 OSR2Q8N2R0 312 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 OR51Q1Q8NH59 317 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 NDNFQ8TB73 568 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 KLF14Q8TD94 323 aaPredicted RBP2.16□□□□□ -2.06
CLK1-206ENST00000461326 ORAOV1Q8WV07 137 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 CDKL2Q92772 493 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 C18orf15Q96N68 181 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 RILPQ96NA2 401 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 OR2M4Q96R27 311 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 ZNF649Q9BS31 505 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 TSGA10Q9BZW7 698 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 GOLPH3Q9H4A6 298 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 TMEM100Q9NV29 134 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 TAS2R5Q9NYW4 299 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 STMN3Q9NZ72 180 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 IL37Q9NZH6 218 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 PRO0628Q9UI54 55 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 FARSAQ9Y285 508 aaKnown RBP2.16□□□□□ -2.06
CLK1-206ENST00000461326 PPIL1Q9Y3C6 166 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 ORC6Q9Y5N6 252 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 ENPP4Q9Y6X5 453 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 COL11A1P12107 1806 aaPredicted RBP2.16□□□□□ -2.06
CLK1-206ENST00000461326 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 CCDC171Q6TFL3 1326 aa2.16□□□□□ -2.06
CLK1-206ENST00000461326 PARP14Q460N5 1801 aa2.15□□□□□ -2.06
CLK1-206ENST00000461326 A0A0G2JMP0 313 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 A0A0X1KG70 313 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 NDUFS5O43920 106 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 ZMPSTE24O75844 475 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 CD9P21926 228 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 PAX6P26367 422 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 P2RY2P41231 377 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 GALR1P47211 349 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 SLC18A1P54219 525 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 IFFO1Q0D2I5 559 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 FUT5Q11128 374 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 DYNC1I2Q13409 638 aaKnown RBP2.15□□□□□ -2.07
CLK1-206ENST00000461326 MAD2L1BPQ15013 274 aaPredicted RBP2.15□□□□□ -2.07
CLK1-206ENST00000461326 LY6EQ16553 131 aa2.15□□□□□ -2.07
CLK1-206ENST00000461326 C18orf21Q32NC0 220 aaPredicted RBP2.15□□□□□ -2.07
CLK1-206ENST00000461326 ATP6AP1LQ52LC2 224 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms