RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CHD3Q12873 2000 aaKnown RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 A0A1B0GTI1 187 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 TEX46H3BTG2 121 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 P2RY10O00398 339 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 PPIHO43447 177 aaKnown RBP9.35□□□□□ -0.91
APTX-209ENST00000460940 ATG12O94817 140 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 AVPI1Q5T686 147 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 GSG1LQ6UXU4 331 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 PEG10Q86TG7 708 aaKnown RBP9.35□□□□□ -0.91
APTX-209ENST00000460940 ZDHHC23Q8IYP9 409 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 SVBPQ8N300 66 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 CIARTQ8N365 385 aaPredicted RBP9.35□□□□□ -0.91
APTX-209ENST00000460940 PRSS35Q8N3Z0 413 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 KLHL36Q8N4N3 616 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 NKAIN3Q8N8D7 197 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 Q8TCH9 128 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 CCL17Q92583 94 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 RAB1CQ92928 201 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 RNF166Q96A37 237 aaPredicted RBP9.35□□□□□ -0.91
APTX-209ENST00000460940 MICU1Q9BPX6 476 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 FN3KRPQ9HA64 309 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 V9GYS6 101 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 TLN2Q9Y4G6 2542 aa9.35□□□□□ -0.91
APTX-209ENST00000460940 SHISA3A0PJX4 238 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 NAP1L6A6NFF2 107 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 CTDSPLO15194 276 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 SYT7O43581 403 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 IGHV2-70P01814 119 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 ISG15P05161 165 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 FBP1P09467 338 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 THBS2P35442 1172 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 PSMB10P40306 273 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 KIR3DL2P43630 455 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 PRDX4Q13162 271 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 KLF9Q13886 244 aaPredicted RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 SPRNQ5BIV9 151 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 OR2G6Q5TZ20 316 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 TMEM244Q5VVB8 128 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 C1orf87Q8N0U7 546 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 OR11L1Q8NGX0 322 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 PPP1R14AQ96A00 147 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 C10orf35Q96D05 121 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 SOX7Q9BT81 388 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 RTL8AQ9BWD3 113 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 PLEKHA1Q9HB21 404 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 MGAT4CQ9UBM8 478 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 PIGLQ9Y2B2 252 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 TANC2Q9HCD6 1990 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 IGHV4-61A0A0C4DH41 118 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 LOC107986453A0A1B0GWG9 222 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 TMEM210A6NLX4 147 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 POM121CA8CG34 1229 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 SMAD7O15105 426 aaKnown RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 NDUFS6O75380 124 aaKnown RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 RGS9O75916 674 aaPredicted RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 IL5P05113 134 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 HEXAP06865 529 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 UBBP0CG47 229 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 FOLR2P14207 255 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 IRF2P14316 349 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 RPS27AP62979 156 aaKnown RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 UBA52P62987 128 aaKnown RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 BDH1Q02338 343 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 ALKBH1Q13686 389 aaKnown RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 IDNKQ5T6J7 187 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 ZNF660Q6AZW8 331 aaPredicted RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 MOGAT3Q86VF5 341 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 BPIFCQ8NFQ6 507 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 OR14K1Q8NGZ2 314 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 GATAD2BQ8WXI9 593 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 ASB13Q8WXK3 278 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 OR5P3Q8WZ94 311 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 DVL3Q92997 716 aaPredicted RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 TMEM68Q96MH6 324 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 HIST1H2AAQ96QV6 131 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 ABHD1Q96SE0 405 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 ISG20L2Q9H9L3 353 aaKnown RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 SEBOXQ9HB31 216 aaPredicted RBP9.34□□□□□ -0.91
APTX-209ENST00000460940 FRRS1LQ9P0K9 344 aa9.34□□□□□ -0.91
APTX-209ENST00000460940 ZANQ9Y493 2812 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 OR5B21A6NL26 309 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 TMEM212A6NML5 194 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 ZNF850A8MQ14 1090 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 SNRPGP15A8MWD9 76 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 TMEM178BH3BS89 294 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 FSTL3O95633 263 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 SERPINA3P01011 423 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 FAHP16930 419 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 MECP2P51608 486 aaKnown RBP9.33□□□□□ -0.92
APTX-209ENST00000460940 CCR6P51684 374 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 NANOS3P60323 173 aaKnown RBP9.33□□□□□ -0.92
APTX-209ENST00000460940 PAN3Q58A45 887 aaKnown RBP9.33□□□□□ -0.92
APTX-209ENST00000460940 TPRA1Q86W33 373 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 SAMD12Q8N8I0 201 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 BEST4Q8NFU0 473 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 PIGCQ92535 297 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 TECTBQ96PL2 329 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 NCOR1P1Q9H4R4 102 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 TRIM36Q9NQ86 728 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 WIPI2Q9Y4P8 454 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms