RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 ST3GAL6Q9Y274 331 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 TRAV24A0A0B4J272 114 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 RNASEK-C17orf49H0YIS7 233 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 CCRL2O00421 344 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 CSN2P05814 226 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 CCL3L1P16619 93 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 PRTN3P24158 256 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 PSMB9P28065 219 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 PRB3Q04118 309 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 GPR176Q14439 515 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 EDDM3AQ14507 147 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 SYT6Q5T7P8 510 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 GLT8D1Q68CQ7 371 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 AWAT2Q6E213 333 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 BPIFB2Q8N4F0 458 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 PPP1R35Q8TAP8 253 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 FOXRED1Q96CU9 486 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 ZNF48Q96MX3 618 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 MS4A7Q9GZW8 240 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 PPA2Q9H2U2 334 aa16.89■□□□□ 0.29
RPUSD3-210ENST00000460909 A0A0A6YYJ9 748 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 IGHV1-69DA0A0B4J2H0 117 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 TRDV1A0A1B0GX56 115 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 MEX3AA1L020 520 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 C17orf98A8MV24 154 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 GEMIN2O14893 280 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 TCF21O43680 179 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 IGHV1-69P01742 117 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 GTF2F2P13984 249 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 CALRP27797 417 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 P2RX3P56373 397 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 ERVFRD-1P60508 538 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 SRSF2Q01130 221 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 BLMHQ13867 455 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 RUSC1-AS1Q66K80 236 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 HCP5Q6MZN7 132 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 ZNF418Q8TF45 676 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 MRPS24Q96EL2 167 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 COQ2Q96H96 371 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 SUCNR1Q9BXA5 334 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 SLITRK2Q9H156 845 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 PCDHB16Q9NRJ7 776 aa16.88■□□□□ 0.29
RPUSD3-210ENST00000460909 A0A1W2PPH5 198 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 SLC22A1O15245 554 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 VENTXO95231 258 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 TNFAIP8O95379 198 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 GALP22466 123 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 HILS1P60008 231 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 AESQ08117 197 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 LINC00596Q86U02 117 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 PDZD9Q8IXQ8 264 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 PIP4P2Q8N4L2 257 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 TMEM104Q8NE00 496 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 GHRLQ9UBU3 117 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 LINC00312Q9Y6C7 94 aa16.87■□□□□ 0.29
RPUSD3-210ENST00000460909 COL6A5A8TX70 2615 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 hADV38S2A0JD32 116 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 SHISA3A0PJX4 238 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 ZNF728P0DKX0 622 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 GLIPR1P48060 266 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 KLRD1Q13241 179 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 MPV17LQ2QL34 196 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 SIGLECL1Q8N7X8 197 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 SLC25A28Q96A46 364 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 PRDM13Q9H4Q3 707 aa16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 AK6Q9Y3D8 172 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-210ENST00000460909 TRAV1-2A0A0B4J238 106 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 OR7C1O76099 320 aaPredicted RBP16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 RBP4P02753 201 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 MGMTP16455 207 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 PAX5Q02548 391 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 ATXN7L3Q14CW9 347 aaPredicted RBP16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 NEDD8Q15843 81 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 TAF9Q16594 264 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 PAN3Q58A45 887 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 NCR3LG1Q68D85 454 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 SUMF2Q8NBJ7 301 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 CORO2AQ92828 525 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 BANF2Q9H503 90 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 ZNF696Q9H7X3 374 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 ESM1Q9NQ30 184 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 KIAA2026Q5HYC2 2103 aa16.85■□□□□ 0.29
RPUSD3-210ENST00000460909 ODAMA1E959 279 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 SLC17A2O00624 439 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 HSPB6O14558 160 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 UBBP0CG47 229 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 VSIG8P0DPA2 414 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 HTR2CP28335 458 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 FGF9P31371 208 aaPredicted RBP16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 UBE2E1P51965 193 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 QRFPP83859 136 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 GUCA2AQ02747 115 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 DEFB112Q30KQ8 113 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 KRBOX4Q5JUW0 171 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 ZDHHC22Q8N966 263 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 TSPAN14Q8NG11 270 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 OR6M1Q8NGM8 313 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 PLPPR1Q8TBJ4 325 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 Q96M66 194 aa16.84■□□□□ 0.29
RPUSD3-210ENST00000460909 ZNF714Q96N38 554 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms