RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 PRR18Q8N4B5 295 aa13.42□□□□□ -0.26
LMNB1-203ENST00000460265 AQP3Q92482 292 aa13.42□□□□□ -0.26
LMNB1-203ENST00000460265 IL17BQ9UHF5 180 aa13.42□□□□□ -0.26
LMNB1-203ENST00000460265 A0A1W2PR80 420 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 SERPINA7P05543 415 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 NUTF2P61970 127 aaKnown RBP13.41□□□□□ -0.26
LMNB1-203ENST00000460265 NHLH2Q02577 135 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 FOXO1Q12778 655 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 GFI1BQ5VTD9 330 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 TUSC5Q8IXB3 177 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 DTWD2Q8NBA8 298 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 DEPPQ9NTK1 212 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 PIEZO2Q9H5I5 2752 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 SRSF10O75494 262 aaKnown RBP13.41□□□□□ -0.26
LMNB1-203ENST00000460265 IFNA21P01568 189 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 OR13C7P0DN81 318 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 ARF1P84077 181 aaKnown RBP13.41□□□□□ -0.26
LMNB1-203ENST00000460265 SLC25A53Q5H9E4 307 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 TSPO2Q5TGU0 170 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 ZNF610Q8N9Z0 462 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 ZSCAN4Q8NAM6 433 aaPredicted RBP13.41□□□□□ -0.26
LMNB1-203ENST00000460265 CYTL1Q9NRR1 136 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 FAM86C1Q9NVL1 165 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 FOXJ2Q9P0K8 574 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 LOC102725191A0A1B0GVB3 256 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 MSGN1A6NI15 193 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 NPIPB13A6NJU9 1138 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 NPIPB4C9JG80 1138 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 RAD51DO75771 328 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 FCGR3AP08637 254 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 GSTP1P09211 210 aaKnown RBP13.41□□□□□ -0.26
LMNB1-203ENST00000460265 CNN3Q15417 329 aaKnown RBP13.41□□□□□ -0.26
LMNB1-203ENST00000460265 RPL7L1Q6DKI1 246 aaKnown RBP13.41□□□□□ -0.26
LMNB1-203ENST00000460265 SMIM8Q96KF7 97 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 ST3GAL6Q9Y274 331 aa13.41□□□□□ -0.26
LMNB1-203ENST00000460265 SMCO3A2RU48 225 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 NTN3O00634 580 aaPredicted RBP13.4□□□□□ -0.26
LMNB1-203ENST00000460265 RHEBQ15382 184 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 SPATA46Q5T0L3 261 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 SPNS3Q6ZMD2 512 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 SGPP2Q8IWX5 399 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 PP6455Q8WZ26 134 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 LOC102723996A0A087X1L8 192 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 ZNF705GA8MUZ8 300 aaPredicted RBP13.4□□□□□ -0.26
LMNB1-203ENST00000460265 HERV-K104P61576 105 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 SLC23A3Q6PIS1 610 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 CPT1CQ8TCG5 803 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 ADAMTS17Q8TE56 1095 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 SIRT7Q9NRC8 400 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 CYCSP99999 105 aaKnown RBP13.4□□□□□ -0.26
LMNB1-203ENST00000460265 PSG4Q00888 419 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 Q0VFX4 171 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 PIGYQ3MUY2 71 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 KHDC3LQ587J8 217 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 DTD1Q8TEA8 209 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 LYZL4Q96KX0 146 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 SIGLEC12Q96PQ1 595 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 DNAJB11Q9UBS4 358 aa13.4□□□□□ -0.26
LMNB1-203ENST00000460265 A0A0A6YYD4 124 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 OR5H1A6NKK0 313 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 TMEM14DPA8MWL7 114 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 NME2P1O60361 137 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 THBS4P35443 961 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 CCL11P51671 97 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 TAS2R31P59538 309 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 TAS2R46P59540 309 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 PCBD1P61457 104 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 SPEM2Q0P670 501 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 TMEM128Q5BJH2 165 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 HIST2H3PS2Q5TEC6 136 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 KCNE4Q8WWG9 221 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 GEMIN2O14893 280 aaKnown RBP13.39□□□□□ -0.27
LMNB1-203ENST00000460265 OR5H8P0DN80 308 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 GUK1Q16774 197 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 IAH1Q2TAA2 248 aaPredicted RBP13.39□□□□□ -0.27
LMNB1-203ENST00000460265 FBXO7Q9Y3I1 522 aa13.39□□□□□ -0.27
LMNB1-203ENST00000460265 TNRC18O15417 2968 aaPredicted RBP13.39□□□□□ -0.27
LMNB1-203ENST00000460265 MT-CO3P00414 261 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 ZBTB25P24278 435 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 MALLQ13021 153 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 FAM27BQ5VT28 67 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 SLC25A42Q86VD7 318 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 ZIC4Q8N9L1 334 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 MALSU1Q96EH3 234 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 SPOCK3Q9BQ16 436 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 PECRQ9BY49 303 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 IGLV3-32A0A0A0MS00 114 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 EFSO43281 561 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 PRH1P02810 166 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 RAB4AP20338 218 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 MRPS34P82930 218 aaKnown RBP13.38□□□□□ -0.27
LMNB1-203ENST00000460265 TNFRSF9Q07011 255 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 OR2T2Q6IF00 324 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 OR5L1Q8NGL2 311 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 MITD1Q8WV92 249 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 PROK2Q9HC23 129 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 SLC7A10Q9NS82 523 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 TMEM38BQ9NVV0 291 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 WDFY3Q8IZQ1 3526 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms