RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 RCN1Q15293 331 aa14.45□□□□□ -0.1
MSH6-207ENST00000456246 SSX2Q16385 188 aa14.45□□□□□ -0.1
MSH6-207ENST00000456246 HEPN1Q6WQI6 88 aa14.45□□□□□ -0.1
MSH6-207ENST00000456246 RTN4RL2Q86UN3 420 aa14.45□□□□□ -0.1
MSH6-207ENST00000456246 OR52N1Q8NH53 320 aa14.45□□□□□ -0.1
MSH6-207ENST00000456246 PIFOQ8TCI5 191 aa14.45□□□□□ -0.1
MSH6-207ENST00000456246 TMEM106AQ96A25 262 aa14.45□□□□□ -0.1
MSH6-207ENST00000456246 OR6C3Q9NZP0 311 aa14.45□□□□□ -0.1
MSH6-207ENST00000456246 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.45□□□□□ -0.1
MSH6-207ENST00000456246 ODAMA1E959 279 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 SLC33A1O00400 549 aaPredicted RBP14.44□□□□□ -0.1
MSH6-207ENST00000456246 OGG1O15527 345 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 CLIC3O95833 236 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 PTGFRP43088 359 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 SOX2P48431 317 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 ARHGDIBP52566 201 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 EFNB2P52799 333 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 ADARB1P78563 741 aaKnown RBP14.44□□□□□ -0.1
MSH6-207ENST00000456246 KRBOX4Q5JUW0 171 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 OR2G6Q5TZ20 316 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 Q6P435 159 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 RNF144BQ7Z419 303 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 NDNFQ8TB73 568 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 ZNF596Q8TC21 504 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 TNFAIP8L1Q8WVP5 186 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 RGP1Q92546 391 aaPredicted RBP14.44□□□□□ -0.1
MSH6-207ENST00000456246 TMEM80Q96HE8 168 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 NCOR1P1Q9H4R4 102 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 TMEM138Q9NPI0 162 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 ZNF281Q9Y2X9 895 aa14.44□□□□□ -0.1
MSH6-207ENST00000456246 EFCAB10A6NFE3 127 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 H0YJX3 145 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 GABRPO00591 440 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 PAX6P26367 422 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 HTR1DP28221 377 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 KCNJ3P48549 501 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 TAS2R43P59537 309 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 SCN1BQ07699 218 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 AESQ08117 197 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 HERPUD1Q15011 391 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 C2orf68Q2NKX9 166 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 XAF1Q6GPH4 301 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 Q6ZTK2 550 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 SATL1Q86VE3 508 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 C8orf59Q8N0T1 100 aaPredicted RBP14.43□□□□□ -0.1
MSH6-207ENST00000456246 Q8NFD4 153 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 OR51A2Q8NGJ7 313 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 OR51T1Q8NGJ9 327 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 CREB3L1Q96BA8 519 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 FAM192AQ9GZU8 254 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 VCXQ9H320 206 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 TAS2R4Q9NYW5 299 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 CNOT2Q9NZN8 540 aaKnown RBP14.43□□□□□ -0.1
MSH6-207ENST00000456246 MEGF8Q7Z7M0 2845 aa14.43□□□□□ -0.1
MSH6-207ENST00000456246 A6NDX4 124 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 ZNF729A6NN14 1252 aaPredicted RBP14.42□□□□□ -0.1
MSH6-207ENST00000456246 F2RL2O00254 374 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 CHST1O43916 411 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 CDK2P24941 298 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 CD34P28906 385 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 CAPGP40121 348 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 GLIPR1P48060 266 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 BDH1Q02338 343 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 PAX5Q02548 391 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 RSU1Q15404 277 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 YIF1BQ5BJH7 314 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 ASCL4Q6XD76 172 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 DYNAPQ8N1N2 210 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 ABHD12Q8N2K0 398 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 OR4D6Q8NGJ1 314 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 COQ2Q96H96 371 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 PCDHB16Q9NRJ7 776 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 PAK1IP1Q9NWT1 392 aaPredicted RBP14.42□□□□□ -0.1
MSH6-207ENST00000456246 IL36GQ9NZH8 169 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 CKLFQ9UBR5 152 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 KIAA2026Q5HYC2 2103 aa14.42□□□□□ -0.1
MSH6-207ENST00000456246 CASQ2O14958 399 aaPredicted RBP14.41□□□□□ -0.1
MSH6-207ENST00000456246 SLC34A1Q06495 639 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 ATXN7L3Q14CW9 347 aaPredicted RBP14.41□□□□□ -0.1
MSH6-207ENST00000456246 PLA1AQ53H76 456 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 PAN3Q58A45 887 aaKnown RBP14.41□□□□□ -0.1
MSH6-207ENST00000456246 NHLRC3Q5JS37 347 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 LDLRAD2Q5SZI1 272 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 OGFRL1Q5TC84 451 aaPredicted RBP14.41□□□□□ -0.1
MSH6-207ENST00000456246 DDI2Q5TDH0 399 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 PRAMEF5Q5TYX0 476 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 DMKNQ6E0U4 476 aaPredicted RBP14.41□□□□□ -0.1
MSH6-207ENST00000456246 ZNF565Q8N9K5 539 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 OR4P4Q8NGL7 312 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 S100A13Q99584 98 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 NKX3-1Q99801 234 aaPredicted RBP14.41□□□□□ -0.1
MSH6-207ENST00000456246 BARHL1Q9BZE3 327 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 DPM3Q9P2X0 92 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 HILPDAQ9Y5L2 63 aa14.41□□□□□ -0.1
MSH6-207ENST00000456246 A0A087X0M5 115 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 TRBV5-5A0A0J9YX44 114 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 A0A1B0GX30 115 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 ZNF780AO75290 641 aaPredicted RBP14.4□□□□□ -0.1
MSH6-207ENST00000456246 BDKRB2P30411 391 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 ZNF93P35789 620 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms