RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TRIM25Q14258 630 aaKnown RBP4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 C17orf58Q2M2W7 97 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KRBOX4Q5JUW0 171 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 AADACL4Q5VUY2 407 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SLX4IPQ5VYV7 408 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DEGS2Q6QHC5 323 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HEPN1Q6WQI6 88 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ADAMTSL5Q6ZMM2 481 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 C16orf82Q7Z2V1 217 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SLC35E3Q7Z769 313 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HAPLN4Q86UW8 402 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SPATA24Q86W54 205 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF695Q8IW36 515 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR13A1Q8NGR1 328 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR10K1Q8NGX5 313 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RFESDQ8TAC1 157 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF596Q8TC21 504 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ITFG2Q969R8 447 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RNF166Q96A37 237 aaPredicted RBP4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RPEQ96AT9 228 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ASB9Q96DX5 294 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KIRREL1Q96J84 757 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR5B12Q96R08 314 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HSPB9Q9BQS6 159 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GAL3ST2Q9H3Q3 398 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CLN6Q9NWW5 311 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 NDE1Q9NXR1 346 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KIF25Q9UIL4 384 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GNG8Q9UK08 70 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HHLA2Q9UM44 414 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MYRFQ9Y2G1 1151 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ARL2BPQ9Y2Y0 163 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SNX5Q9Y5X3 404 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MEIKINA0A087WXM9 373 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF736B4DX44 427 aaPredicted RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SLC33A1O00400 549 aaPredicted RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TOR1AO14656 332 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FKBP6O75344 327 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DCTN3O75935 186 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SLC2A2P11168 524 aaPredicted RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF20P17024 532 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MYF6P23409 242 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CD34P28906 385 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MNDAP41218 407 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GPR12P47775 334 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CRISP1P54107 249 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MTCP1P56278 107 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 NANOS3P60323 173 aaKnown RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FLOT2Q14254 428 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KPNB1Q14974 876 aaKnown RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PTGES3Q15185 160 aaKnown RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PIGYQ3MUY2 71 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF260Q3ZCT1 412 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CASC10Q5T4H9 136 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ASPHD1Q5U4P2 390 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAHD1Q6P587 224 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MEPCEQ7L2J0 689 aaKnown RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 STPG2Q8N412 459 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DTX3Q8N9I9 347 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR4D6Q8NGJ1 314 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MUC7Q8TAX7 377 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PLPPR1Q8TBJ4 325 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TMEM163Q8TC26 289 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MRGPRDQ8TDS7 321 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CASTOR1Q8WTX7 329 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 UTP4Q969X6 686 aaKnown RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OPALINQ96PE5 141 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RCHY1Q96PM5 261 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 NR1H4Q96RI1 486 aaPredicted RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 THTPAQ9BU02 230 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HMG20AQ9NP66 347 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ISYNA1Q9NPH2 558 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CALYQ9NYX4 217 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DNAJB9Q9UBS3 223 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 LSM4Q9Y4Z0 139 aaKnown RBP4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TMEM14AQ9Y6G1 99 aa4.7□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TNCP24821 2201 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HERC2O95714 4834 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 IGHV3-43A0A0B4J1X8 118 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 METTL15A6NJ78 407 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DHRS7CA6NNS2 312 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 NCBP2LA6PVI3 153 aaKnown RBP4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 H0YJX3 145 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HSD17B6O14756 317 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SLC31A2O15432 143 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 IL1AP01583 271 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OCM2P0CE71 109 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OCMP0CE72 109 aaPredicted RBP4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 UBCP0CG48 685 aaKnown RBP4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM106CPP0CH98 169 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 T-ENOLP0DO92 83 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 IGHV3-43DP0DP04 118 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ATF1P18846 271 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 POLR2IP36954 125 aaKnown RBP4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CEACAM3P40198 252 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MYCNOSP40205 109 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RBP2P50120 134 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FUT6P51993 359 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ARHGDIBP52566 201 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms