RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 ZNF774Q6NX45 483 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 C5orf24Q7Z6I8 188 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 WDR5BQ86VZ2 330 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 UCN2Q96RP3 112 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 SMOC1Q9H4F8 434 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 METTL15P1P0C7V9 234 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 NDUFB7P17568 137 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 TCN2P20062 427 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 C9orf50Q5SZB4 431 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 ZNF705AQ6ZN79 300 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 RDH5Q92781 318 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 MRGPRX4Q96LA9 322 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 OR6C1Q96RD1 312 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 TAAR9Q96RI9 348 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 RSG1Q9BU20 258 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 TUBA4BQ9H853 241 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 SEBOXQ9HB31 216 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 HS3ST1O14792 307 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 SOX15O60248 233 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 ERVFRD-1P60508 538 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 TBC1D26Q86UD7 250 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 LHX4Q969G2 390 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 ZNF845Q96IR2 970 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 ZNF385AQ96PM9 386 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 TP53RKQ96S44 253 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 MMP17Q9ULZ9 603 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 TCAPO15273 167 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 SOD3P08294 240 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 ANOS1P23352 680 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 C21orf62-AS1Q17RA5 79 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 SLC16A14Q7RTX9 510 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 HDGFL3Q9Y3E1 203 aa12.08□□□□□ -0.48
UBE2D3-210ENST00000453744 IGSF23A1L1A6 192 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 ZNF814B7Z6K7 855 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 MPPED1O15442 326 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 PPYP01298 95 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 IGHV2-5P01817 119 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 PGA3P0DJD8 388 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 CFPP27918 469 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 SDSLQ96GA7 329 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 RANBP2P49792 3224 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 HGFACQ04756 655 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 SNAI3Q3KNW1 292 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 PHOSPHO2Q8TCD6 241 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 MUCL1Q96DR8 90 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 GINS3Q9BRX5 216 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 KIAA1456Q9P272 454 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 HS3ST3B1Q9Y662 390 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 XKRY2A2RUG3 117 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 RPS2P15880 293 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 PAX6P26367 422 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 PKIAP61925 76 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 PMP22Q01453 160 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 KIAA2026Q5HYC2 2103 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 GAPTQ8N292 157 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 NTNG2Q96CW9 530 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 GPR87Q9BY21 358 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 CHST5Q9GZS9 411 aa12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 AURKAIP1Q9NWT8 199 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-210ENST00000453744 CACNA1HO95180 2353 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 FGF7P21781 194 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 ZP4Q12836 540 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 CLN3Q13286 438 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 NCR3LG1Q68D85 454 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 MARS2Q96GW9 593 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 SCRG1O75711 98 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 SRPXP78539 464 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 H3F3AP84243 136 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 SRYQ05066 204 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 MAML2Q8IZL2 1156 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 EXTL1Q92935 676 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 ZNF816-ZNF321PA0A0X1KG74 233 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 E9PLN8 166 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 TRAF3IP2O43734 574 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 SRP19P09132 144 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 PMS2P11Q13670 270 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 ELOBQ15370 118 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 TGIF2LXQ8IUE1 241 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 FAM185AQ8N0U4 392 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 OR6X1Q8NH79 312 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 MVB12AQ96EY5 273 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 CALHM2Q9HA72 323 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 CCL28Q9NRJ3 127 aa12.06□□□□□ -0.48
UBE2D3-210ENST00000453744 VCANP13611 3396 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 CLDN1O95832 211 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 GALNSP34059 522 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 CASP6P55212 293 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 STARD6P59095 220 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 OR10AD1Q8NGE0 317 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 PRRG4Q9BZD6 226 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 TUBD1Q9UJT1 453 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 PPP1R3CQ9UQK1 317 aa12.05□□□□□ -0.48
UBE2D3-210ENST00000453744 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms