RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SUMF1Q8NBK3 374 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 POC1AQ8NBT0 407 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 NANPQ8TBE9 248 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 PIK3IP1Q96FE7 263 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 REPIN1Q9BWE0 567 aaKnown RBP12.7□□□□□ -0.38
SF1-211ENST00000448404 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.7□□□□□ -0.38
SF1-211ENST00000448404 NDRG3Q9UGV2 375 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 CEACAM18A8MTB9 384 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 AGPAT2O15120 278 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 NME2P1O60361 137 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 NME2P22392 152 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 UBA52P62987 128 aaKnown RBP12.7□□□□□ -0.38
SF1-211ENST00000448404 ZNF766Q5HY98 468 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 MDP1Q86V88 176 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 PRR18Q8N4B5 295 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 FDCSPQ8NFU4 85 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 RTN4IP1Q8WWV3 396 aaPredicted RBP12.7□□□□□ -0.38
SF1-211ENST00000448404 TSNAXQ99598 290 aaKnown RBP12.7□□□□□ -0.38
SF1-211ENST00000448404 BCO1Q9HAY6 547 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 ARHGAP21Q5T5U3 1957 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 ZNF728P0DKX0 622 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 PVALBP20472 110 aaPredicted RBP12.69□□□□□ -0.38
SF1-211ENST00000448404 SOX8P57073 446 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 EXTL1Q92935 676 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 TMEM45BQ96B21 275 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 POM121L2Q96KW2 1035 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 LUZP4Q9P127 313 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 INTS1Q8N201 2190 aaKnown RBP12.69□□□□□ -0.38
SF1-211ENST00000448404 APC2O95996 2303 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 PDCD6O75340 191 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 IDH3GP51553 393 aaPredicted RBP12.69□□□□□ -0.38
SF1-211ENST00000448404 MALLQ13021 153 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 SWI5Q1ZZU3 235 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 PLEKHN1Q494U1 663 aaPredicted RBP12.69□□□□□ -0.38
SF1-211ENST00000448404 COLCA1Q6ZS62 124 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 PUSL1Q8N0Z8 303 aaKnown RBP12.69□□□□□ -0.38
SF1-211ENST00000448404 OR52M1Q8NGK5 317 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 FZR1Q9UM11 496 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 CD300LBA8K4G0 201 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 ZNF806P0C7X5 589 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 GUCA2BQ16661 112 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 ABCA11PQ4W5N1 156 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 CXorf67Q86X51 503 aaPredicted RBP12.69□□□□□ -0.38
SF1-211ENST00000448404 LDLRAD3Q86YD5 345 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 SGPP2Q8IWX5 399 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 SECTM1Q8WVN6 248 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 C10orf35Q96D05 121 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 WDYHV1Q96HA8 205 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 NMES1Q9C002 83 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 RAB18Q9NP72 206 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 BIN3Q9NQY0 253 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 SLC2A9Q9NRM0 540 aa12.69□□□□□ -0.38
SF1-211ENST00000448404 AGFG2O95081 481 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 ZNF345Q14585 488 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 FAM53AQ6NSI3 398 aaPredicted RBP12.68□□□□□ -0.38
SF1-211ENST00000448404 C2orf50Q96LR7 162 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 TP53RKQ96S44 253 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 PRDM14Q9GZV8 571 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 NECAP2Q9NVZ3 263 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 MRPS18CQ9Y3D5 142 aaKnown RBP12.68□□□□□ -0.38
SF1-211ENST00000448404 TRGV5A0A0B4J1U4 118 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 IGKV1D-13A0A0B4J2D9 117 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 PHF1O43189 567 aaPredicted RBP12.68□□□□□ -0.38
SF1-211ENST00000448404 IGKV1-13P0DP09 117 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 SPP1P10451 314 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 ZNF528Q3MIS6 628 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 PAN3Q58A45 887 aaKnown RBP12.68□□□□□ -0.38
SF1-211ENST00000448404 SLC16A13Q7RTY0 426 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 ERGIC1Q969X5 290 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 SPSB4Q96A44 273 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 FAM117AQ9C073 453 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 FAM96BQ9Y3D0 163 aa12.68□□□□□ -0.38
SF1-211ENST00000448404 PQLC2LA1A4F0 135 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 CRYM-AS1A6NIL9 109 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 SLC22A20A6NK97 555 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 KLRC4-KLRK1H3BQV0 150 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 LRP3O75074 770 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 ACTL6AO96019 429 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 HERPUD1Q15011 391 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 IZUMO4Q1ZYL8 232 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 SPIN3Q5JUX0 258 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 ASCL4Q6XD76 172 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 ZNF600Q6ZNG1 722 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 CNEP1R1Q8N9A8 125 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 CPNE2Q96FN4 548 aaPredicted RBP12.67□□□□□ -0.38
SF1-211ENST00000448404 SLC25A32Q9H2D1 315 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 ZNF318Q5VUA4 2279 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 A0A1B0GV50 99 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 EIF3GO75821 320 aaKnown RBP eCLIP12.67□□□□□ -0.38
SF1-211ENST00000448404 CD46P15529 392 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 FUT3P21217 361 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 CEBPDP49716 269 aaPredicted RBP12.67□□□□□ -0.38
SF1-211ENST00000448404 PRSS54Q6PEW0 395 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 ZDHHC23Q8IYP9 409 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 ZFP62Q8NB50 900 aaPredicted RBP12.67□□□□□ -0.38
SF1-211ENST00000448404 HRH4Q9H3N8 390 aa12.67□□□□□ -0.38
SF1-211ENST00000448404 KLF13Q9Y2Y9 288 aaPredicted RBP12.67□□□□□ -0.38
SF1-211ENST00000448404 CUL9Q8IWT3 2517 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms