RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TRAPPC2LH3BP13 241 aa14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 SLC33A1O00400 549 aaPredicted RBP14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 CALCRP30988 508 aa14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 DAZAP2Q15038 168 aaPredicted RBP14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 ELP2Q6IA86 826 aa14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 FAHD2BQ6P2I3 314 aaPredicted RBP14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 CLEC9AQ6UXN8 241 aa14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 PEG10Q86TG7 708 aaKnown RBP14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 FAHD2AQ96GK7 314 aa14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 NECAP2Q9NVZ3 263 aa14.42□□□□□ -0.1
LAPTM4B-201ENST00000445593 ZNF728P0DKX0 622 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 FUT3P21217 361 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 IGHV1-2P23083 117 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 TCF15Q12870 199 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 FOXF2Q12947 444 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 ZNF169Q14929 603 aaPredicted RBP14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 ARL6IP1Q15041 203 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 MEX3BQ6ZN04 569 aaKnown RBP14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 TMEM185AQ8NFB2 350 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 BCL2L2Q92843 193 aaPredicted RBP14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 SCGB3A2Q96PL1 93 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 ADGRG4Q8IZF6 3080 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 PQLC2LA1A4F0 135 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 OR6C65A6NJZ3 312 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 SCARB1Q8WTV0 552 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 RNF122Q9H9V4 155 aa14.41□□□□□ -0.1
LAPTM4B-201ENST00000445593 RPS2P15880 293 aaKnown RBP14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 IAH1Q2TAA2 248 aaPredicted RBP14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 SPIN3Q5JUX0 258 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 SGPP2Q8IWX5 399 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 PXT1Q8NFP0 134 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 MRPL24Q96A35 216 aaKnown RBP14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 ZNF286AQ9HBT8 521 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 IFNA2P01563 188 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 OR5AC1P0C628 307 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 CEACAM21Q3KPI0 293 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 LSM5Q9Y4Y9 91 aaKnown RBP14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 A0A1B0GV90 55 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 DBX1A6NMT0 343 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 SCTP09683 121 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 RRASP10301 218 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 NRN1LQ496H8 165 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 ACOT7LQ6ZUV0 252 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 C9orf106Q8NAJ2 232 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 SECTM1Q8WVN6 248 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 SDHAF2Q9NX18 166 aa14.4□□□□□ -0.1
LAPTM4B-201ENST00000445593 AADACP22760 399 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 NSUN5P2Q63ZY6 315 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 MKXQ8IYA7 352 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 OR6K3Q8NGY3 331 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 RTN4IP1Q8WWV3 396 aaPredicted RBP14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 RNF126Q9BV68 326 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 SMIM3Q9BZL3 60 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 IGF2RP11717 2491 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 ZNF44P15621 663 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 RBMS3Q6XE24 437 aaKnown RBP14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 KCNRGQ8N5I3 272 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 CDH20Q9HBT6 801 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 GSN-AS1Q9NRJ2 163 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 HSF4Q9ULV5 492 aa14.39□□□□□ -0.11
LAPTM4B-201ENST00000445593 TNFSF12O43508 249 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 DIRAS3O95661 229 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 GRPP07492 148 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 PTAFRP25105 342 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 IL1F10Q8WWZ1 152 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 PLCE1Q9P212 2302 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 A0A0D9SG52 128 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 KCNJ3P48549 501 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 HERV-K104P61576 105 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 TFAP2EQ6VUC0 442 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 ASCL4Q6XD76 172 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 NANOS1Q8WY41 292 aaKnown RBP14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 TAAR6Q96RI8 345 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 TLN1Q9Y490 2541 aaKnown RBP14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 H7C2Y5 167 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 BCL2L11O43521 198 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 NXPH3O95157 252 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 TFF1P04155 84 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 RBM39Q14498 530 aaKnown RBP14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 TBC1D28Q2M2D7 210 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 RTL6Q6ICC9 239 aa14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 GMPPAQ96IJ6 420 aaPredicted RBP14.38□□□□□ -0.11
LAPTM4B-201ENST00000445593 hCG_1807616A0A1W2PRN6 198 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 GLP1RP43220 463 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 PCP4P48539 62 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 LYZL2Q7Z4W2 148 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 DMRTC2Q8IXT2 367 aaPredicted RBP14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 PRSS33Q8NF86 280 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 OR1S1Q8NH92 325 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 SLC2A9Q9NRM0 540 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 TRAV17A0A0B4J275 112 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 H0YL77 283 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 SIRPB1O00241 398 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 TM4SF5O14894 197 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 PHF1O43189 567 aaPredicted RBP14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 RCC1P18754 421 aaPredicted RBP14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 CLINT1Q14677 625 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 FAM214BQ7L5A3 538 aa14.37□□□□□ -0.11
LAPTM4B-201ENST00000445593 PDZD9Q8IXQ8 264 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms