RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
USP39-205ENST00000442708 TBX15Q96SF7 602 aa13.19□□□□□ -0.3
USP39-205ENST00000442708 MRPS26Q9BYN8 205 aaKnown RBP13.19□□□□□ -0.3
USP39-205ENST00000442708 A0A1W2PQ09 198 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 HSPB6O14558 160 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 CRTAPO75718 401 aaPredicted RBP13.18□□□□□ -0.3
USP39-205ENST00000442708 TFAP2AP05549 437 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 LIPFP07098 398 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 RAB3BP20337 219 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 EDDM3BP56851 147 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 PRB3Q04118 309 aaPredicted RBP13.18□□□□□ -0.3
USP39-205ENST00000442708 PLA2G7Q13093 441 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 GPR176Q14439 515 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 RAB11BQ15907 218 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 TAF9Q16594 264 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 HES5Q5TA89 166 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 GDPD3Q7L5L3 318 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 FAM185AQ8N0U4 392 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 BPIFB2Q8N4F0 458 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 CHST4Q8NCG5 386 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 UPRTQ96BW1 309 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 COQ2Q96H96 371 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 Q96M66 194 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 WDFY2Q96P53 400 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 PCGF1Q9BSM1 259 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 SELENOIQ9C0D9 397 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 PLGRKTQ9HBL7 147 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 ONECUT1Q9UBC0 465 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 LPAR3Q9UBY5 353 aa13.18□□□□□ -0.3
USP39-205ENST00000442708 TRBV23-1A0A0A0MS06 115 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 A0A0B4J203 849 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 IFITM5A6NNB3 132 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 TMEM14DPA8MWL7 114 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 PDCD5O14737 125 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 MGST3O14880 152 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
USP39-205ENST00000442708 TOX4O94842 621 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 MPIG6BO95866 241 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 UBBP0CG47 229 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 CCL3L1P16619 93 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 HNF1AP20823 631 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 SDC2P34741 201 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 GLIPR1P48060 266 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 ALDH3B2P48448 385 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 ERVFRD-1P60508 538 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 AESQ08117 197 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 ATXN7L3Q14CW9 347 aaPredicted RBP13.17□□□□□ -0.3
USP39-205ENST00000442708 SIGIRRQ6IA17 410 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 KIR3DL3Q8N743 410 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 OR5D13Q8NGL4 314 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 PLPPR1Q8TBJ4 325 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 FUNDC2Q9BWH2 189 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 PCDHB16Q9NRJ7 776 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 GHRLQ9UBU3 117 aa13.17□□□□□ -0.3
USP39-205ENST00000442708 KIAA2026Q5HYC2 2103 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 IGHV3OR16-10A0A075B7F0 116 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 AIREO43918 545 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 BPNT1O95861 308 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 CSN2P05814 226 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 IGHV4-38-2P0DP08 117 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 SLC2A2P11168 524 aaPredicted RBP13.16□□□□□ -0.3
USP39-205ENST00000442708 SRD5A1P18405 259 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 CFPP27918 469 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 SRP14P37108 136 aaKnown RBP13.16□□□□□ -0.3
USP39-205ENST00000442708 DLX6P56179 175 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 P2RX3P56373 397 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 LSM3P62310 102 aaKnown RBP13.16□□□□□ -0.3
USP39-205ENST00000442708 MPV17LQ2QL34 196 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 PAN3Q58A45 887 aaKnown RBP13.16□□□□□ -0.3
USP39-205ENST00000442708 VMO1Q7Z5L0 202 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 RTN4RL2Q86UN3 420 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 SUMF2Q8NBJ7 301 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 FAM3DQ96BQ1 224 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 MRPS24Q96EL2 167 aaKnown RBP13.16□□□□□ -0.3
USP39-205ENST00000442708 DMRTB1Q96MA1 342 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 KCTD7Q96MP8 289 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 NICN1Q9BSH3 213 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 DPCDQ9BVM2 203 aaPredicted RBP13.16□□□□□ -0.3
USP39-205ENST00000442708 NAA50Q9GZZ1 169 aaKnown RBP13.16□□□□□ -0.3
USP39-205ENST00000442708 ING3Q9NXR8 418 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 STEAP1Q9UHE8 339 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 SOX21Q9Y651 276 aaPredicted RBP13.16□□□□□ -0.3
USP39-205ENST00000442708 KPTNQ9Y664 436 aa13.16□□□□□ -0.3
USP39-205ENST00000442708 A0A0A6YYD4 124 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 LDLRAD4O15165 306 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 FAM157CP0CG43 387 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 ARSBP15848 533 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 ERP29P30040 261 aaKnown RBP13.15□□□□□ -0.3
USP39-205ENST00000442708 PSMD7P51665 324 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 RPS27AP62979 156 aaKnown RBP13.15□□□□□ -0.3
USP39-205ENST00000442708 MXD1Q05195 221 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 C2orf76Q3KRA6 126 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 ATAD3CQ5T2N8 411 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.3
USP39-205ENST00000442708 SLC16A12Q6ZSM3 486 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms