RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SUMF2Q8NBJ7 301 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 OR5H6Q8NGV6 325 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 NICN1Q9BSH3 213 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 DCUN1D5Q9BTE7 237 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 DPCDQ9BVM2 203 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-208ENST00000438518 NXF2Q9GZY0 626 aaKnown RBP15.29■□□□□ 0.04
HDAC6-208ENST00000438518 SHARPINQ9H0F6 387 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 ATG5Q9H1Y0 275 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 DIABLOQ9NR28 239 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 COMMD3Q9UBI1 195 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 LPAR3Q9UBY5 353 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 METRNQ9UJH8 293 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 CR1P17927 2039 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 PPIAL4CA0A0B4J2A2 164 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 TMEM82A0PJX8 343 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 FOXI3A8MTJ6 420 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-208ENST00000438518 B4DSR2 109 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 PSPNO60542 156 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 CHATP28329 748 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 BLVRBP30043 206 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-208ENST00000438518 OR3A1P47881 315 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 VEGFCP49767 419 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 EFNB2P52799 333 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 GRK1Q15835 563 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 GDPD3Q7L5L3 318 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 SAMD12Q8N8I0 201 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 OR10R2Q8NGX6 335 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 SLC25A38Q96DW6 304 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 S100A16Q96FQ6 103 aaKnown RBP15.28■□□□□ 0.04
HDAC6-208ENST00000438518 COX4I2Q96KJ9 171 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 MMP27Q9H306 513 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 NCOR1P1Q9H4R4 102 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 PEX16Q9Y5Y5 336 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 VPS13CQ709C8 3753 aa15.28■□□□□ 0.04
HDAC6-208ENST00000438518 A0A0A6YYD4 124 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 A0A1B0GW55 424 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 POM121CA8CG34 1229 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 H7C1Q1 480 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 RAB27BO00194 218 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 DUX4L2P0CJ85 424 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 DUX4L3P0CJ86 424 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 DUX4L4P0CJ87 422 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 DUX4L5P0CJ88 424 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 DUX4L6P0CJ89 424 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 DUX4L7P0CJ90 424 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 NDUFB7P17568 137 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 TMEM249Q2WGJ8 235 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 SIGIRRQ6IA17 410 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 DUX4L9Q6RFH8 374 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-208ENST00000438518 Q6ZTK2 550 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 MCFD2Q8NI22 146 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 ST8SIA4Q92187 359 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 RAB3CQ96E17 227 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.27■□□□□ 0.04
HDAC6-208ENST00000438518 PLEKHJ1Q9NW61 149 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 DUX4Q9UBX2 424 aa15.27■□□□□ 0.04
HDAC6-208ENST00000438518 A0A1W2PPH5 198 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 SERPINE3A8MV23 424 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 SOCS1O15524 211 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 TFF1P04155 84 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 LIPFP07098 398 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 IL2RGP31785 369 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 SEC61A1P61619 476 aaKnown RBP15.26■□□□□ 0.03
HDAC6-208ENST00000438518 MEF2CQ06413 473 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-208ENST00000438518 PLA2G7Q13093 441 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 PDCD1Q15116 288 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 LINC01356Q8N9X3 169 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 OR4S1Q8NGB4 309 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 C8orf46Q8TAG6 207 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 NEK7Q8TDX7 302 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 DCTN5Q9BTE1 182 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 PPA2Q9H2U2 334 aa15.26■□□□□ 0.03
HDAC6-208ENST00000438518 LOC105371242A0A075B767 164 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 TRAV20A0A0B4J274 112 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 KIAA1324LA8MWY0 1029 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-208ENST00000438518 RGS5O15539 181 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 TPPPO94811 219 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 MSMBP08118 114 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 SELLP14151 372 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 HIST1H1DP16402 221 aaKnown RBP15.25■□□□□ 0.03
HDAC6-208ENST00000438518 GATA3P23771 443 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 P2RX3P56373 397 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 TMEM50BP56557 158 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 NKAPLQ5M9Q1 402 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 SLC35E4Q6ICL7 350 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 CMTM4Q8IZR5 234 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 C18orf12Q96KH6 178 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 CHST6Q9GZX3 395 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 RIMS4Q9H426 269 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-208ENST00000438518 RABL2AQ9UBK7 228 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-208ENST00000438518 RABL2BQ9UNT1 228 aa15.25■□□□□ 0.03
HDAC6-208ENST00000438518 YLPM1P49750 1951 aaKnown RBP15.25■□□□□ 0.03
HDAC6-208ENST00000438518 DOCK11Q5JSL3 2073 aa15.24■□□□□ 0.03
HDAC6-208ENST00000438518 hADV38S2A0JD32 116 aa15.24■□□□□ 0.03
HDAC6-208ENST00000438518 FAM157AC9JC47 383 aa15.24■□□□□ 0.03
HDAC6-208ENST00000438518 XRCC3O43542 346 aa15.24■□□□□ 0.03
HDAC6-208ENST00000438518 ENSAO43768 121 aaKnown RBP15.24■□□□□ 0.03
HDAC6-208ENST00000438518 GSTP1P09211 210 aaKnown RBP15.24■□□□□ 0.03
HDAC6-208ENST00000438518 FOSL1P15407 271 aa15.24■□□□□ 0.03
HDAC6-208ENST00000438518 TALDO1P37837 337 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms