RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 A0A1W2PPI3 338 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 ODAMA1E959 279 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 FUOMA2VDF0 154 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 GNGT2O14610 69 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 SH2D1BO14796 132 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 E2F6O75461 281 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 GATBO75879 557 aaKnown RBP11.61□□□□□ -0.55
HDAC8-213ENST00000436675 CYB5AP00167 134 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 IGKV1D-33P01593 117 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 IGKV1-33P01594 117 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 IGHG2P01859 326 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 CCL1P22362 96 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 ATP1B3P54709 279 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 ACTR3P61158 418 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 KIR2DS1Q14954 304 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 LTC4SQ16873 150 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 C17orf58Q2M2W7 97 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 KRBOX4Q5JUW0 171 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 DHFR2Q86XF0 187 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 YIPF7Q8N8F6 280 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 OR9G1Q8NH87 305 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 RFT1Q96AA3 541 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 HRASLS5Q96KN8 279 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 TBX5Q99593 518 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 TEX12Q9BXU0 123 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 ZNF556Q9HAH1 456 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 HYDINQ4G0P3 5121 aa11.61□□□□□ -0.55
HDAC8-213ENST00000436675 NCBP2LA6PVI3 153 aaKnown RBP11.6□□□□□ -0.55
HDAC8-213ENST00000436675 ZNF670-ZNF695F2Z2N8 137 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 M0R129 80 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 FGF16O43320 207 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 SERPINA3P01011 423 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 ZNF44P15621 663 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 RBP2P50120 134 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 GNG10P50151 68 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 MS4A2Q01362 244 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 GPR50Q13585 617 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 ATXN7L3Q14CW9 347 aaPredicted RBP11.6□□□□□ -0.55
HDAC8-213ENST00000436675 PNLIPRP3Q17RR3 467 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 SPATS1Q496A3 300 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 ADAMTSL5Q6ZMM2 481 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 SSX6Q7RTT6 188 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 COQ2Q96H96 371 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 KIRREL1Q96J84 757 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 ADI1Q9BV57 179 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 CHST5Q9GZS9 411 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 PPIL3Q9H2H8 161 aaKnown RBP11.6□□□□□ -0.55
HDAC8-213ENST00000436675 SLC25A19Q9HC21 320 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 HMG20AQ9NP66 347 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 PCDHB16Q9NRJ7 776 aa11.6□□□□□ -0.55
HDAC8-213ENST00000436675 AMMECR1Q9Y4X0 333 aaPredicted RBP11.6□□□□□ -0.55
HDAC8-213ENST00000436675 A0A087X0M5 115 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 IGHV3-72A0A0B4J1Y9 119 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 A0A1B0GX30 115 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 ZNF729A6NN14 1252 aaPredicted RBP11.59□□□□□ -0.55
HDAC8-213ENST00000436675 J3QR06 171 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 AP4M1O00189 453 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 PRKYO43930 277 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 RAP2AP10114 183 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 GLP1RP43220 463 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 GPR12P47775 334 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 MTCP1P56278 107 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 CDC42P60953 191 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 BNIP1Q12981 228 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 CATSPERDQ86XM0 798 aa11.59□□□□□ -0.55
HDAC8-213ENST00000436675 IGKV1-9A0A0C4DH69 117 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 IGKV1-12A0A0C4DH73 117 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 A0A1W2PPE3 182 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 IGKV1D-12P01611 117 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 KRT8P05787 483 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 CDX1P47902 265 aaPredicted RBP11.58□□□□□ -0.56
HDAC8-213ENST00000436675 REG1BP48304 166 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 MADCAM1Q13477 382 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 MOB3BQ86TA1 216 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 RDH10Q8IZV5 341 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 OR11H1Q8NG94 326 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 OR5D18Q8NGL1 313 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 SPACA5Q96QH8 159 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 ADGRL4Q9HBW9 690 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 NDE1Q9NXR1 346 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 PSG11Q9UQ72 335 aa11.58□□□□□ -0.56
HDAC8-213ENST00000436675 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 HSPB6O14558 160 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 FRMD6-AS1P0C7T7 363 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 RAB7AP51149 207 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 PDZK1IP1Q13113 114 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 FOXE3Q13461 319 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 TRIM25Q14258 630 aaKnown RBP11.57□□□□□ -0.56
HDAC8-213ENST00000436675 GK3PQ14409 553 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 RFESDQ8TAC1 157 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 RBMXL1Q96E39 390 aaKnown RBP11.57□□□□□ -0.56
HDAC8-213ENST00000436675 ADAT3Q96EY9 351 aaPredicted RBP11.57□□□□□ -0.56
HDAC8-213ENST00000436675 ZMAT4Q9H898 229 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 CLN6Q9NWW5 311 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 CALYQ9NYX4 217 aa11.57□□□□□ -0.56
HDAC8-213ENST00000436675 H2AFY2Q9P0M6 372 aaPredicted RBP11.57□□□□□ -0.56
HDAC8-213ENST00000436675 LOC107986453A0A1B0GWG9 222 aa11.56□□□□□ -0.56
HDAC8-213ENST00000436675 SLC33A1O00400 549 aaPredicted RBP11.56□□□□□ -0.56
HDAC8-213ENST00000436675 SNX3O60493 162 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms