RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SPIN3Q5JUX0 258 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 RBM48Q5RL73 367 aaKnown RBP4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 ATAD3CQ5T2N8 411 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 FAM27D1Q5T7N8 215 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 LIPKQ5VXJ0 399 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 RNLSQ5VYX0 342 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF782Q6ZMW2 699 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 C17orf107Q6ZR85 190 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 PHC2Q8IXK0 858 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 Q8IYB0 196 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 SAXO1Q8IYX7 474 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 JAGN1Q8N5M9 183 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZDHHC22Q8N966 263 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZSCAN4Q8NAM6 433 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR5D13Q8NGL4 314 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 RPS4Y2Q8TD47 263 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 MUL1Q969V5 352 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 SNX22Q96L94 193 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 DERL3Q96Q80 235 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 C19orf24Q9BVV8 132 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 FAM234AQ9H0X4 552 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 METTL9Q9H1A3 318 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 TCF7L1Q9HCS4 588 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 EXOSC4Q9NPD3 245 aaKnown RBP4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 TMEM138Q9NPI0 162 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 ESM1Q9NQ30 184 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 CKLFQ9UBR5 152 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 LSM2Q9Y333 95 aaKnown RBP4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 FAM96BQ9Y3D0 163 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 KPTNQ9Y664 436 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 U3KQE9 123 aa4.73□□□□□ -1.65
HMGB3P24-201ENST00000433260 TRBV5-7A0A0A0MS05 114 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 TRAV39A0A0B4J263 110 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 A0A1W2PPH5 198 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 SHISA3A0PJX4 238 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 MEIOCA2RUB1 952 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 HOXA3O43365 443 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 GPX5O75715 221 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 SRMP19623 302 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 LMO1P25800 156 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 PAX6P26367 422 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 GLIPR1P48060 266 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 MTNR1BP49286 362 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 GP2P55259 537 aaKnown RBP4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 RPS25P62851 125 aaKnown RBP4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 EMX1Q04741 257 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 ACSM1Q08AH1 577 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 ATXN7L3Q14CW9 347 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF146Q15072 292 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 SLC9A3R2Q15599 337 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 SLC22A6Q4U2R8 563 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF529Q6P280 563 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 Q6P435 159 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 GLIPR1L1Q6UWM5 242 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 UNQ9370/PRO34162Q6UXP9 181 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 PRSS48Q7RTY5 328 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 TRAPPC6BQ86SZ2 158 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR8H2Q8N162 312 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 C11orf42Q8N5U0 333 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 MS4A15Q8N5U1 240 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 PXT1Q8NFP0 134 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR4D6Q8NGJ1 314 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 C8orf46Q8TAG6 207 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 PPP1R35Q8TAP8 253 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 UFD1Q92890 307 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 CPNE2Q96FN4 548 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 JMJD8Q96S16 334 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 MGLLQ99685 303 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 PPIL3Q9H2H8 161 aaKnown RBP4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 PPA2Q9H2U2 334 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 BANF2Q9H503 90 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 Q9H521 79 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF581Q9P0T4 197 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 FOXJ3Q9UPW0 622 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 ST3GAL6Q9Y274 331 aa4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 MRPS28Q9Y2Q9 187 aaKnown RBP4.72□□□□□ -1.65
HMGB3P24-201ENST00000433260 DSCAML1Q8TD84 2053 aa4.71□□□□□ -1.65
HMGB3P24-201ENST00000433260 TRBV23-1A0A0A0MS06 115 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 A0A0A6YYJ9 748 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 hCG_1809904A0A1W2PP81 198 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 A0A1W2PPE2 198 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 A0A1W2PR64 198 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 A0A1W2PRV1 198 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 hADV38S2A0JD32 116 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 FAM172BPA6NC97 362 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 DNAJC9-AS1A6NH13 148 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 M0R1W7 72 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 SLC33A1O00400 549 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 MGST3O14880 152 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 GEMIN2O14893 280 aaKnown RBP4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 NPFFO15130 113 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 MMP23AO75900 390 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 CD1AP06126 327 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 CPEP16870 476 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 OMGP23515 440 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 PRTN3P24158 256 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 MAPK3P27361 379 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 OR3A1P47881 315 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 BPIFB3P59826 476 aa4.71□□□□□ -1.66
HMGB3P24-201ENST00000433260 UBA52P62987 128 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms