RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 TECTBQ96PL2 329 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 TP53RKQ96S44 253 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 P4HTMQ9NXG6 502 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 KPTNQ9Y664 436 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 TMEM265A0A087WTH1 108 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 COLCA2A8K830 154 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 VSTM5A8MXK1 200 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 CYTIPO60759 359 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 PPYP01298 95 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 IGHEP01854 428 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 NPBWR2P48146 333 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 PPT1P50897 306 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 AKR1D1P51857 326 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 TRIM61Q5EBN2 209 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 ETV3LQ6ZN32 361 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 SLC25A26Q70HW3 274 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 WDR5BQ86VZ2 330 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 BATF2Q8N1L9 274 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 SLC35G3Q8N808 338 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 CPEB3Q8NE35 698 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 HPSE2Q8WWQ2 592 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 SCRT1Q9BWW7 348 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 C1QTNF5Q9BXJ0 243 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 BIN3Q9NQY0 253 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 PARPBPQ9NWS1 579 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 RCL1Q9Y2P8 373 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 TMED3Q9Y3Q3 217 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 PMELP40967 661 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 FHITP49789 147 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 NOVA1P51513 510 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 UCP2P55851 309 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 NHLH2Q02577 135 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 ZNF616Q08AN1 781 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 COMMD1Q8N668 190 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 OR4D5Q8NGN0 318 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 ESRP2Q9H6T0 727 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 SMCO4Q9NRQ5 59 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 PINLYPA6NC86 204 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 IGHV3-9P01782 118 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 GDF1P27539 372 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 ACER2Q5QJU3 275 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 MEX3BQ6ZN04 569 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 CPNE4Q96A23 557 aaPredicted RBP11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 PRDM14Q9GZV8 571 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 SH3BGRL3Q9H299 93 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 TCFL5Q9UL49 500 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 BOD1L1Q8NFC6 3051 aa11.47□□□□□ -0.57
SNRNP200-202ENST00000429650 SMPD2O60906 423 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 PAX6P26367 422 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 CAMLGP49069 296 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 HMGN3Q15651 99 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 AKIRIN2Q53H80 203 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 C2CD4CQ8TF44 421 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 RNF122Q9H9V4 155 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 PRDM6Q9NQX0 595 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 DOCK10Q96BY6 2186 aa11.46□□□□□ -0.57
SNRNP200-202ENST00000429650 TRAV20A0A0B4J274 112 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 ZNF98A6NK75 572 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 MPPED1O15442 326 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 ZNHIT1O43257 154 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 C1QL1O75973 258 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 PDGFBP01127 241 aaPredicted RBP11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 TDGF1P13385 188 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 GFRA1P56159 465 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 GUK1Q16774 197 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 CDCP2Q5VXM1 449 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 SLC23A3Q6PIS1 610 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 COLCA1Q6ZS62 124 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 ZFP82Q8N141 532 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 Q8NFD4 153 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 BCL2L14Q9BZR8 327 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 C19orf12Q9NSK7 152 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 MRPS18CQ9Y3D5 142 aaKnown RBP11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 NBEAQ8NFP9 2946 aa11.46□□□□□ -0.58
SNRNP200-202ENST00000429650 FREM1Q5H8C1 2179 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 RPL36A-HNRNPH2H7BZ11 118 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 LMO1P25800 156 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 AKR1C3P42330 323 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 KCNJ3P48549 501 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 PEAR1Q5VY43 1037 aaPredicted RBP11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 HSD17B11Q8NBQ5 300 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 EXTL1Q92935 676 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 TMEM45BQ96B21 275 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 C11orf1Q9H5F2 150 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 PCSK5Q92824 1860 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 F10P00742 488 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 FOLR2P14207 255 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 GNRHRP30968 328 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 CYB561P49447 251 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 RAB5CP51148 216 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 GNMTQ14749 295 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 NRN1LQ496H8 165 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 C15orf54Q8N8G6 183 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 OR56B2PQ8NGI1 322 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 BOD1Q96IK1 185 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 CLCC1Q96S66 551 aa11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 PAPOLGQ9BWT3 736 aaKnown RBP11.45□□□□□ -0.58
SNRNP200-202ENST00000429650 TMEM222Q9H0R3 208 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms