RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 EXTL1Q92935 676 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 SPSB4Q96A44 273 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 TMEM45BQ96B21 275 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 TP53RKQ96S44 253 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 DDA1Q9BW61 102 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 NKX6-2Q9C056 277 aaPredicted RBP9.99□□□□□ -0.81
FIRRE-201ENST00000427391 TLNRD1Q9H1K6 362 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 RGCCQ9H4X1 137 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 ZNF286AQ9HBT8 521 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 TREM1Q9NP99 234 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 MTCH1Q9NZJ7 389 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 AMDHD2Q9Y303 409 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 KIAA2026Q5HYC2 2103 aa9.99□□□□□ -0.81
FIRRE-201ENST00000427391 DIDO1Q9BTC0 2240 aaKnown RBP9.98□□□□□ -0.81
FIRRE-201ENST00000427391 GTF3C1Q12789 2109 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 IGKV3D-15A0A087WSY6 115 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 ZNF732B4DXR9 585 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 PHF1O43189 567 aaPredicted RBP9.98□□□□□ -0.81
FIRRE-201ENST00000427391 DEDDO75618 318 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 SYNGR4O95473 234 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 IFNA21P01568 189 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 NAAAQ02083 359 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 MRPL21Q7Z2W9 205 aaKnown RBP9.98□□□□□ -0.81
FIRRE-201ENST00000427391 ZNF100Q8IYN0 542 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 C17orf78Q8N4C9 275 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 SUMF1Q8NBK3 374 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 PRRX2Q99811 253 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
FIRRE-201ENST00000427391 PRDM14Q9GZV8 571 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 LPAR3Q9UBY5 353 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 MEMO1Q9Y316 297 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 MRPS18CQ9Y3D5 142 aaKnown RBP9.98□□□□□ -0.81
FIRRE-201ENST00000427391 RP1L1Q8IWN7 2480 aaPredicted RBP9.98□□□□□ -0.81
FIRRE-201ENST00000427391 MED6O75586 246 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 ATG12O94817 140 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 TNFSF15O95150 251 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 MT-CO3P00414 261 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 SCTP09683 121 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 MEOX1P50221 254 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 RNFT1Q5M7Z0 435 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 NEK7Q8TDX7 302 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 ADAMTS17Q8TE56 1095 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 ARL11Q969Q4 196 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 ZPBPQ9BS86 351 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 B4GALT7Q9UBV7 327 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 ZDHHC8Q9ULC8 765 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 RFNGQ9Y644 331 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 CEP250Q9BV73 2442 aa9.98□□□□□ -0.81
FIRRE-201ENST00000427391 GVINP1Q7Z2Y8 2422 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 PQLC2LA1A4F0 135 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 WISP2O76076 250 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 NXPH3O95157 252 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 PET100P0DJ07 73 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 C21orf62-AS1Q17RA5 79 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 ZNF528Q3MIS6 628 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.97□□□□□ -0.81
FIRRE-201ENST00000427391 CBLN2Q8IUK8 224 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 APH1AQ96BI3 265 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 KCNIP3Q9Y2W7 256 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 SPTBN4Q9H254 2564 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 TRAV39A0A0B4J263 110 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 ATP6V1G2-DDX39BF2Z307 99 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 F8W036 122 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 MUC1P15941 1255 aaPredicted RBP9.97□□□□□ -0.81
FIRRE-201ENST00000427391 BLOC1S1P78537 153 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 PMP22Q01453 160 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 TMEM164Q5U3C3 297 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 MSI2Q96DH6 328 aaKnown RBP9.97□□□□□ -0.81
FIRRE-201ENST00000427391 WFDC1Q9HC57 220 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 DNAJB11Q9UBS4 358 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 TUBD1Q9UJT1 453 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 OTOGLQ3ZCN5 2332 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 CACNA1GO43497 2377 aa9.97□□□□□ -0.81
FIRRE-201ENST00000427391 IGKV1D-13A0A0B4J2D9 117 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 C9JQL5 133 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 C1QL1O75973 258 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 PPYP01298 95 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 IGKV1-13P0DP09 117 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 WNT5AP41221 380 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 FHITP49789 147 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 HERV-K104P61576 105 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 SRSF6Q13247 344 aaKnown RBP9.96□□□□□ -0.81
FIRRE-201ENST00000427391 SPIN3Q5JUX0 258 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 HES3Q5TGS1 186 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 HAGHLQ6PII5 290 aaPredicted RBP9.96□□□□□ -0.81
FIRRE-201ENST00000427391 MYPOPQ86VE0 399 aaPredicted RBP9.96□□□□□ -0.81
FIRRE-201ENST00000427391 LDLRAD3Q86YD5 345 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 CCDC36Q8IYA8 594 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 IL22RA1Q8N6P7 574 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 MOB3AQ96BX8 217 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 IL36GQ9NZH8 169 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 ZNF391Q9UJN7 358 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 ARHGAP21Q5T5U3 1957 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 MGAQ8IWI9 3026 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 RAB19A4D1S5 217 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 GLP1RP43220 463 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 NHLH2Q02577 135 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 SMCO1Q147U7 214 aa9.96□□□□□ -0.81
FIRRE-201ENST00000427391 HERPUD1Q15011 391 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms