RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 hADV38S2A0JD32 116 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 M0R1W7 72 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 PDCD5O14737 125 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 GEMIN2O14893 280 aaKnown RBP12.96□□□□□ -0.33
BRAT1-202ENST00000421712 MMP9P14780 707 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 HTR2CP28335 458 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 PSMD7P51665 324 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 PRB3Q04118 309 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-202ENST00000421712 AESQ08117 197 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 TAF9Q16594 264 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 ATAD3CQ5T2N8 411 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 SYT6Q5T7P8 510 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-202ENST00000421712 METAP1DQ6UB28 335 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-202ENST00000421712 TRAPPC6BQ86SZ2 158 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 FAM46BQ96A09 425 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 SELENOIQ9C0D9 397 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 CST11Q9H112 138 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 ZNF696Q9H7X3 374 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 ZNF69Q9UC07 566 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 STUB1Q9UNE7 303 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 MPIG6BO95866 241 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 FSHBP01225 129 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 UBBP0CG47 229 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 MGMTP16455 207 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 CCL3L1P16619 93 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 CD36P16671 472 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 GALP22466 123 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 DLX1P56177 255 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 MEF2CQ06413 473 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-202ENST00000421712 ZNF273Q14593 569 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 ATXN7L3Q14CW9 347 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-202ENST00000421712 P2RY14Q15391 338 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 RAB11BQ15907 218 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 MPV17LQ2QL34 196 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 KRBOX4Q5JUW0 171 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 C1orf100Q5SVJ3 147 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 CD200R1LQ6Q8B3 271 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 BRD3OSQ6XYD6 125 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 C1orf122Q6ZSJ8 110 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 LINC00596Q86U02 117 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 LYPD6Q86Y78 171 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 OR6M1Q8NGM8 313 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 NEK7Q8TDX7 302 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 ZNF418Q8TF45 676 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-202ENST00000421712 MRPS24Q96EL2 167 aaKnown RBP12.95□□□□□ -0.34
BRAT1-202ENST00000421712 SLC6A7Q99884 636 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 OR51E2Q9H255 320 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 METTL8Q9H825 291 aaKnown RBP12.95□□□□□ -0.34
BRAT1-202ENST00000421712 V9GY05 133 aa12.95□□□□□ -0.34
BRAT1-202ENST00000421712 TRAV1-2A0A0B4J238 106 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 TRAV24A0A0B4J272 114 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 LOC100506127A0A0U1RQW1 187 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 CENPVL3A0A0U1RRI6 287 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 A0A1W2PRD5 423 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 A0A1W2PRF3 423 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 A0A1W2PRM7 423 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 TCF21O43680 179 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 ZNF728P0DKX0 622 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 ERP29P30040 261 aaKnown RBP12.94□□□□□ -0.34
BRAT1-202ENST00000421712 RANBP1P43487 201 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 GLIPR1P48060 266 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 P2RX3P56373 397 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 NHLRC3Q5JS37 347 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 RUSC1-AS1Q66K80 236 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 RBMS3Q6XE24 437 aaKnown RBP12.94□□□□□ -0.34
BRAT1-202ENST00000421712 BCL6BQ8N143 479 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-202ENST00000421712 Q8N7P7 452 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 SUMF2Q8NBJ7 301 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 TMEM104Q8NE00 496 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 CHCHD6Q9BRQ6 235 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 DPCDQ9BVM2 203 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-202ENST00000421712 SUCNR1Q9BXA5 334 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 BARHL1Q9BZE3 327 aa12.94□□□□□ -0.34
BRAT1-202ENST00000421712 TXNL4BQ9NX01 149 aaKnown RBP12.94□□□□□ -0.34
BRAT1-202ENST00000421712 TRGV10A0A0A0MS01 117 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 IGHV1-69DA0A0B4J2H0 117 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 SLC22A1O15245 554 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 IGHV1-69P01742 117 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 ARSBP15848 533 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 RAB3BP20337 219 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 PRTN3P24158 256 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 GADD45AP24522 165 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 GUCA2AQ02747 115 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 KLRD1Q13241 179 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 HES5Q5TA89 166 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 NCR3LG1Q68D85 454 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 OR10K2Q6IF99 312 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 BRICD5Q6PL45 260 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 ZNF714Q96N38 554 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 GFI1Q99684 422 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 ZNF581Q9P0T4 197 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 LINC00312Q9Y6C7 94 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 JMJD1CQ15652 2540 aa12.93□□□□□ -0.34
BRAT1-202ENST00000421712 KIAA2026Q5HYC2 2103 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 MEIKINA0A087WXM9 373 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 MCRIP1C9JLW8 97 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 SLC17A2O00624 439 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 BPNT1O95861 308 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 CSN2P05814 226 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 FGF9P31371 208 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms