RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GABRA6Q16445 453 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 CLLU1Q5K131 121 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 IGFL2Q6UWQ7 119 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 SEM1Q6ZVN7 128 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 OR1J1Q8NGS3 322 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 CPNE2Q96FN4 548 aaPredicted RBP7.51□□□□□ -1.21
SNCA-206ENST00000420646 GP6Q9HCN6 339 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 NECAP2Q9NVZ3 263 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 SHPKQ9UHJ6 478 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 LINC00862A6NCI5 91 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 TNFSF12O43508 249 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 ZNF728P0DKX0 622 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 COX5BP10606 129 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 TAS2R31P59538 309 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 PPP1CBP62140 327 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 HERPUD1Q15011 391 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 TBC1D28Q2M2D7 210 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 FAM53AQ6NSI3 398 aaPredicted RBP7.5□□□□□ -1.21
SNCA-206ENST00000420646 LYZL2Q7Z4W2 148 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 RTN4IP1Q8WWV3 396 aaPredicted RBP7.5□□□□□ -1.21
SNCA-206ENST00000420646 MSL2Q9HCI7 577 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 RYDENQ9NUL5 291 aaKnown RBP7.5□□□□□ -1.21
SNCA-206ENST00000420646 PCP4L1A6NKN8 68 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 B8ZZF3 427 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 F5H0A9 414 aaPredicted RBP7.5□□□□□ -1.21
SNCA-206ENST00000420646 CST4P01036 141 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 IFNA2P01563 188 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 CEACAM1P13688 526 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 HLA-GP17693 338 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 FGF12P61328 243 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 RBM39Q14498 530 aaKnown RBP7.5□□□□□ -1.21
SNCA-206ENST00000420646 MEX3BQ6ZN04 569 aaKnown RBP7.5□□□□□ -1.21
SNCA-206ENST00000420646 Q6ZT83 130 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 MKXQ8IYA7 352 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 IL1F10Q8WWZ1 152 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 ST8SIA2Q92186 375 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 NARFLQ9H6Q4 476 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 CDH20Q9HBT6 801 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 SLC2A9Q9NRM0 540 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 IL36GQ9NZH8 169 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 ATPIF1Q9UII2 106 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 PKDREJQ9NTG1 2253 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 PTPRQQ9UMZ3 2332 aa7.5□□□□□ -1.21
SNCA-206ENST00000420646 TRAV24A0A0B4J272 114 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 IGKV1D-13A0A0B4J2D9 117 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 IGKV1-6A0A0C4DH72 117 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SIRPB1O00241 398 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 WNT9BO14905 357 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 DIRAS3O95661 229 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 IGKV1-13P0DP09 117 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 ZNF44P15621 663 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 UCP2P55851 309 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 FGL1Q08830 312 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 IAH1Q2TAA2 248 aaPredicted RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 ACSF3Q4G176 576 aaPredicted RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 ABCA11PQ4W5N1 156 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 LPCAT3Q6P1A2 487 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 DHRS11Q6UWP2 260 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SUMF2Q8NBJ7 301 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 INO80EQ8NBZ0 244 aaPredicted RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 OR5A2Q8NGI9 324 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 OR6K3Q8NGY3 331 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SECTM1Q8WVN6 248 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 FAM117AQ9C073 453 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 OR2S2Q9NQN1 319 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 UFSP2Q9NUQ7 469 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 ZNF175Q9Y473 711 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 KANTRA0A1W2PQU2 76 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 WDR1O75083 606 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 TNFSF13O75888 250 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 TSPAN9O75954 239 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 NXPH3O95157 252 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 RRASP10301 218 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 TGFBR3Q03167 851 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SRSF4Q08170 494 aaKnown RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 ARL6IP1Q15041 203 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SPIN3Q5JUX0 258 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 OR2A2Q6IF42 318 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 ACOT7LQ6ZUV0 252 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SGPP2Q8IWX5 399 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 KCNRGQ8N5I3 272 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 WDR31Q8NA23 367 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SCCPDHQ8NBX0 429 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 LHFPL5Q8TAF8 219 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 KLF14Q8TD94 323 aaPredicted RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 MRPS24Q96EL2 167 aaKnown RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 ESRP2Q9H6T0 727 aaKnown RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 ZNF286AQ9HBT8 521 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 LHX6Q9UPM6 363 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 ZNF891A8MT65 544 aaPredicted RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 LRP3O75074 770 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 DTYMKP23919 212 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 ARHGDIBP52566 201 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 GNG3P63215 75 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 ZNF154Q13106 437 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 ZNF169Q14929 603 aaPredicted RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 AANATQ16613 207 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 PLEKHN1Q494U1 663 aaPredicted RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 GGNBP1Q5YKI7 109 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 LDLRAD3Q86YD5 345 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms