RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CD3GP09693 182 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 CD37P11049 281 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 SELLP14151 372 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 KCNJ3P48549 501 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 GZMKP49863 264 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 EFNB2P52799 333 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 LCN2P80188 198 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 LOXL1Q08397 574 aaPredicted RBP7.05□□□□□ -1.28
TRIM48-201ENST00000417545 KRBOX4Q5JUW0 171 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 TMEM69Q5SWH9 247 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 METAP1DQ6UB28 335 aaPredicted RBP7.05□□□□□ -1.28
TRIM48-201ENST00000417545 BTNL3Q6UXE8 466 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 TREML4Q6UXN2 200 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 DNM1P46Q6ZS02 220 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 Q8NFD4 153 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 OR10R2Q8NGX6 335 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 TM2D1Q9BX74 207 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 CTSZQ9UBR2 303 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 LPAR3Q9UBY5 353 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 ZNF222Q9UK12 451 aa7.05□□□□□ -1.28
TRIM48-201ENST00000417545 APCP25054 2843 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 TRAV18A0A075B6X5 111 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 LOC105371242A0A075B767 164 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 MEIKINA0A087WXM9 373 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 TRGV10A0A0A0MS01 117 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 A0A0A6YYH2 397 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 A0A1B0GW55 424 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 TMEM30CPA0ZSE6 113 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 A6NHS1 94 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 A6NJ64 397 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 B4DSR2 109 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 F5H0A9 414 aaPredicted RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 K7N7A8 449 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 LDLRAD4O15165 306 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 SOCS1O15524 211 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 ENSAO43768 121 aaKnown RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 ECDO95905 644 aaPredicted RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 APOA1P02647 267 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 DUX4L2P0CJ85 424 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 DUX4L3P0CJ86 424 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 DUX4L4P0CJ87 422 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 DUX4L5P0CJ88 424 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 DUX4L6P0CJ89 424 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 DUX4L7P0CJ90 424 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 GLP1RP43220 463 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 GNG2P59768 71 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 SEC61A1P61619 476 aaKnown RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 RPL31P62899 125 aaKnown RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 QRFPP83859 136 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 LCE2AQ5TA79 106 aaPredicted RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 WDR25Q64LD2 544 aaPredicted RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 CYB5R2Q6BCY4 276 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 Q6P435 159 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 BRICD5Q6PL45 260 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 DUX4L9Q6RFH8 374 aaPredicted RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 BTN2A1Q7KYR7 527 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 C6orf201Q7Z4U5 140 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 GLCCI1Q86VQ1 547 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 CMTM4Q8IZR5 234 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 BPIFB2Q8N4F0 458 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 LINC01356Q8N9X3 169 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 OR4S1Q8NGB4 309 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 OR4M1Q8NGD0 313 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 ARHGAP5-AS1Q96IT6 56 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 CMTM3Q96MX0 182 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 PECRQ9BY49 303 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 MMP27Q9H306 513 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 IFT22Q9H7X7 185 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 SEBOXQ9HB31 216 aaPredicted RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 RAB9BQ9NP90 201 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 ONECUT1Q9UBC0 465 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 EXTL2Q9UBQ6 330 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 DUX4Q9UBX2 424 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 TRAPPC2LQ9UL33 140 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 MRPS7Q9Y2R9 242 aaKnown RBP7.04□□□□□ -1.28
TRIM48-201ENST00000417545 MAB21L2Q9Y586 359 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 ABCA12Q86UK0 2595 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 NBPF19A0A087WUL8 3843 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 CENPEQ02224 2701 aa7.04□□□□□ -1.28
TRIM48-201ENST00000417545 SPG11Q96JI7 2443 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 TRBV23-1A0A0A0MS06 115 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 TRAV24A0A0B4J272 114 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 PPIAL4CA0A0B4J2A2 164 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 hCG_1809904A0A1W2PP81 198 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 A0A1W2PPE2 198 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 A0A1W2PR64 198 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 A0A1W2PRV1 198 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 hADV38S2A0JD32 116 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 TMEM82A0PJX8 343 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 PSPNO60542 156 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 GLAP06280 429 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 EIF4EP06730 217 aaKnown RBP7.03□□□□□ -1.28
TRIM48-201ENST00000417545 MSMBP08118 114 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 PPIAL4GP0DN37 164 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 HIST1H1DP16402 221 aaKnown RBP7.03□□□□□ -1.28
TRIM48-201ENST00000417545 ZNF16P17020 682 aaPredicted RBP7.03□□□□□ -1.28
TRIM48-201ENST00000417545 CDK2P24941 298 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 LMO1P25800 156 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 CHATP28329 748 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 IL2RGP31785 369 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms