RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521		K7N7A8	449 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	CYB5A	P00167	134 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	IGKV1D-12	P01611	117 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	TMEM225B	P0DP42	221 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	NPBWR2	P48146	333 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	ALDH3B2	P48448	385 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	JAGN1	Q8N5M9	183 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	TNFAIP8L1	Q8WVP5	186 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	FAM192A	Q9GZU8	254 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	SLITRK2	Q9H156	845 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	RNF167	Q9H6Y7	350 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	SSR3	Q9UNL2	185 aa		13.41	□□□□□ -0.26
DDR1-231	ENST00000417521	NPFF	O15130	113 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	FBP1	P09467	338 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	CALCB	P10092	127 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	BCL3	P20749	454 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	FGF9	P31371	208 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	COL10A1	Q03692	680 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	TMEM200B	Q69YZ2	307 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	LYPD6	Q86Y78	171 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	CPNE2	Q96FN4	548 aa	Predicted RBP	13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	GFI1	Q99684	422 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	CENPO	Q9BU64	300 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	ZNF747	Q9BV97	191 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	CHIA	Q9BZP6	476 aa		13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	AK6	Q9Y3D8	172 aa	Known RBP	13.4	□□□□□ -0.26
DDR1-231	ENST00000417521	hCG_1809904	A0A1W2PP81	198 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A1W2PPE2	198 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A1W2PR64	198 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A1W2PRV1	198 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	FAM181B	A6NEQ2	426 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	POM121C	A8CG34	1229 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	ZNF737	O75373	536 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	PTGFR	P43088	359 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	IER3	P46695	156 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	DLX1	P56177	255 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	RPL15	P61313	204 aa	Known RBP	13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	PRB3	Q04118	309 aa	Predicted RBP	13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	KLRD1	Q13241	179 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	FIP1L1	Q6UN15	594 aa	Known RBP	13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	C11orf42	Q8N5U0	333 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	NKAIN3	Q8N8D7	197 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	ASCC1	Q8N9N2	400 aa	Known RBP	13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	EMG1	Q92979	244 aa	Known RBP	13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	FUNDC2	Q9BWH2	189 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	DPAGT1	Q9H3H5	408 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	TNFRSF19	Q9NS68	423 aa		13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	RBFOX1	Q9NWB1	397 aa	Known RBP	13.39	□□□□□ -0.27
DDR1-231	ENST00000417521	MEGF11	A6BM72	1044 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	AIRE	O43918	545 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	CDRT1	O95170	752 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	CRYBA1	P05813	215 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	MYL9	P24844	172 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	FAM58A	Q8N1B3	248 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	OR4M1	Q8NGD0	313 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	OR4D6	Q8NGJ1	314 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	DYRK2	Q92630	601 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	SNX22	Q96L94	193 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	HEXA-AS1	Q9H8Q6	139 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	IL36RN	Q9UBH0	155 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	SCOC	Q9UIL1	159 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	ING4	Q9UNL4	249 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	GSTK1	Q9Y2Q3	226 aa		13.38	□□□□□ -0.27
DDR1-231	ENST00000417521	TRAV1-2	A0A0B4J238	106 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A1B0GUS0	222 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A1W2PRD5	423 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A1W2PRF3	423 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A1W2PRM7	423 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	MEIOC	A2RUB1	952 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	SMIM30	A4D0T7	59 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	KDM4B	O94953	1096 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	IGHV4-59	P01825	116 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	SAA4	P35542	130 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	TGFBR1	P36897	503 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	LSM3	P62310	102 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	ZNF146	Q15072	292 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	MIDN	Q504T8	468 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	SPIN3	Q5JUX0	258 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	HCP5	Q6MZN7	132 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	SHISA2	Q6UWI4	295 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	ASCL4	Q6XD76	172 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	GPR141	Q7Z602	305 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	CDH26	Q8IXH8	852 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	SAXO1	Q8IYX7	474 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	OR8H2	Q8N162	312 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	OR10K1	Q8NGX5	313 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	NAA50	Q9GZZ1	169 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	RHOF	Q9HBH0	211 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	ZNRD1	Q9P1U0	126 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	MMP24	Q9Y5R2	645 aa		13.37	□□□□□ -0.27
DDR1-231	ENST00000417521	HAND1	O96004	215 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	PAH	P00439	452 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	SNU13	P55769	128 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	OR10A3	P58181	314 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	TIMM50	Q3ZCQ8	353 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	GPR107	Q5VW38	600 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	GLT8D1	Q68CQ7	371 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	GDPD3	Q7L5L3	318 aa		13.36	□□□□□ -0.27

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