RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 CNN3Q15417 329 aaKnown RBP10.47□□□□□ -0.73
LINC00339-202ENST00000416769 FAM76BQ5HYJ3 339 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 PLCXD3Q63HM9 321 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 SLC36A1Q7Z2H8 476 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 SATL1Q86VE3 508 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 BEND2Q8NDZ0 799 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 DNAAF1Q8NEP3 725 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 HPSE2Q8WWQ2 592 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 ORAI1Q96D31 301 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 RNF170Q96K19 258 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 CHCHD6Q9BRQ6 235 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 TLNRD1Q9H1K6 362 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 MMP28Q9H239 520 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 TAS2R4Q9NYW5 299 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 DNAH9Q9NYC9 4486 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 TRAV1-2A0A0B4J238 106 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 OR5B21A6NL26 309 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 TMEM210A6NLX4 147 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 ADARB2-AS1A8MUL3 147 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 MAGEB3O15480 346 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 ANGPTL7O43827 346 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 RHBDL1O75783 438 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 NDUFB7P17568 137 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 BDKRB2P30411 391 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 PPP3R1P63098 170 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 GNG3P63215 75 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 GUCA2AQ02747 115 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 PLA1AQ53H76 456 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 LRRC10Q5BKY1 277 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 CEP78Q5JTW2 689 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 FAM27D1Q5T7N8 215 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 GPR107Q5VW38 600 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 C22orf42Q6IC83 251 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 C11orf87Q6NUJ2 197 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 ZNF788Q6ZQV5 615 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 CDH26Q8IXH8 852 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 CMTM4Q8IZR5 234 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 DYNAPQ8N1N2 210 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 ZNRF1Q8ND25 227 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 OR13C9Q8NGT0 318 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 OR5R1Q8NH85 324 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 ANGPTL6Q8NI99 470 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 PIFOQ8TCI5 191 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 SPSB1Q96BD6 273 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 KCTD7Q96MP8 289 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 RTL8AQ9BWD3 113 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 TMEM138Q9NPI0 162 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 C19orf12Q9NSK7 152 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 SLC25A10Q9UBX3 287 aaPredicted RBP10.46□□□□□ -0.73
LINC00339-202ENST00000416769 MAB21L2Q9Y586 359 aa10.46□□□□□ -0.73
LINC00339-202ENST00000416769 IGKV1D-17A0A075B6S4 117 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 TRAV8-7A0A075B6U6 113 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 LOC100506127A0A0U1RQW1 187 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 A0A1W2PQ09 198 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 PQLC2LA1A4F0 135 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF732B4DXR9 585 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 MAS1P04201 325 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 OCMP0CE72 109 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-202ENST00000416769 CD37P11049 281 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 AZGP1P25311 298 aaKnown RBP10.45□□□□□ -0.74
LINC00339-202ENST00000416769 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
LINC00339-202ENST00000416769 KIR2DS4P43632 304 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 RBP2P50120 134 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 PSMD7P51665 324 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 UBE2E1P51965 193 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 ATP1B3P54709 279 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 TMBIM6P55061 237 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 TMEM95Q3KNT9 176 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 ATPAF1Q5TC12 328 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-202ENST00000416769 Q6ZS46 218 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 SLC16A12Q6ZSM3 486 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 LHFPL2Q6ZUX7 228 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 LHFPL4Q7Z7J7 247 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 LRRTM1Q86UE6 522 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 TPRA1Q86W33 373 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 CLVS1Q8IUQ0 354 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-202ENST00000416769 MKXQ8IYA7 352 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 NPRL2Q8WTW4 380 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 PHF21AQ96BD5 680 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 BORCS8Q96FH0 119 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 NKX3-1Q99801 234 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-202ENST00000416769 BCL7BQ9BQE9 202 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 CENPOQ9BU64 300 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF702PQ9H963 129 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 SERTAD4Q9NUC0 356 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 NDUFA13Q9P0J0 144 aa10.45□□□□□ -0.74
LINC00339-202ENST00000416769 FAM230AA0A1W2PPH8 454 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 MEX3AA1L020 520 aaKnown RBP10.44□□□□□ -0.74
LINC00339-202ENST00000416769 PDCD5O14737 125 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 SIGLEC5O15389 551 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 GABARAPO95166 117 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 HCKP08631 526 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 COX7A1P24310 79 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 MYL9P24844 172 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 MTNR1BP49286 362 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 CEBPDP49716 269 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-202ENST00000416769 RAB13P51153 203 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 GPM6AP51674 278 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 LOXL3P58215 753 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 LRRC75BQ2VPJ9 315 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms