RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ACOT12Q8WYK0 555 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 OR8B2Q96RD0 313 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 SOSTQ9BQB4 213 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 URM1Q9BTM9 101 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 TM2D1Q9BX74 207 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 RHOFQ9HBH0 211 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 GLS2Q9UI32 602 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 ELF5Q9UKW6 265 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 KIAA2026Q5HYC2 2103 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 FAM25AB3EWG3 89 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 FAM25CB3EWG5 89 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 FAM25GB3EWG6 89 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF737O75373 536 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 CHRM2P08172 466 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 PTHLHP12272 177 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 ELK1P19419 428 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 CPT2P23786 658 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 TNFSF8P32971 234 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 S100A5P33763 92 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 OR3A1P47881 315 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 PPP5CP53041 499 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 TMEM50BP56557 158 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 LCN2P80188 198 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 GRK1Q15835 563 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 NHLRC3Q5JS37 347 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 PLAC9Q5JTB6 97 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 RAB12Q6IQ22 244 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF841Q6ZN19 808 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 SLC36A1Q7Z2H8 476 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 H1FXQ92522 213 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 MRPS24Q96EL2 167 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 SDSLQ96GA7 329 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 ARHGAP5-AS1Q96IT6 56 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 FAAP24Q9BTP7 215 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 DPCDQ9BVM2 203 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 SHARPINQ9H0F6 387 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 MIXL1Q9H2W2 232 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 FBLN5Q9UBX5 448 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 MIOXQ9UGB7 285 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 ETV7Q9Y603 341 aa11.71□□□□□ -0.53
CHRNA1-204ENST00000409323 TRAV39A0A0B4J263 110 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 RAB27BO00194 218 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 NDUFB3O43676 98 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 TK1P04183 234 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 GNB3P16520 340 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 RAB6AP20340 208 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 ZFP36P26651 326 aaKnown RBP11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 EDDM3BP56851 147 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 GNB2P62879 340 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 AESQ08117 197 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 MPV17LQ2QL34 196 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 UBE2NLQ5JXB2 153 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 ATPAF1Q5TC12 328 aaPredicted RBP11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 MZT2AQ6P582 158 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 NLRC3Q7RTR2 1065 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 ZNF561Q8N587 486 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 PLPPR1Q8TBJ4 325 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 NEDD4LQ96PU5 975 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 SULT4A1Q9BR01 284 aa11.71□□□□□ -0.54
CHRNA1-204ENST00000409323 ITPR3Q14573 2671 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 F5H0A9 414 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 K7N7A8 449 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 CDK2P24941 298 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 CHATP28329 748 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 LRRC10Q5BKY1 277 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 WDR25Q64LD2 544 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM89BQ8N5H3 189 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 OR10R2Q8NGX6 335 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 GCDHQ92947 438 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 MED30Q96HR3 178 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 CMTM3Q96MX0 182 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 HDHD3Q9BSH5 251 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 DCTN5Q9BTE1 182 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 SSBP3Q9BWW4 388 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 PLEKHJ1Q9NW61 149 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 CLN8Q9UBY8 286 aa11.7□□□□□ -0.54
CHRNA1-204ENST00000409323 METTL21EPA6NDL7 271 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 FOXI3A8MTJ6 420 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 NDUFA2O43678 99 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 PDCD6O75340 191 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 FSTL3O95633 263 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 FUT3P21217 361 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 GLIPR1P48060 266 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 ESCO2Q56NI9 601 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 Q6ZTK2 550 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 OR56B1Q8NGI3 324 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 RAB39BQ96DA2 213 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 RAB3CQ96E17 227 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 COQ2Q96H96 371 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 SNX22Q96L94 193 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 PECRQ9BY49 303 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 KAAG1Q9UBP8 84 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 KCNK7Q9Y2U2 307 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 WNK2Q9Y3S1 2297 aa11.69□□□□□ -0.54
CHRNA1-204ENST00000409323 DSCAML1Q8TD84 2053 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 TRAV18A0A075B6X5 111 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 C22orf46C9J442 243 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms