RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FAM90A15PP0C7V4 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A13PP0C7W8 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A14PP0C7W9 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A24PP0C7X0 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 CLEC9AQ6UXN8 241 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 OR4S1Q8NGB4 309 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 OR5D13Q8NGL4 314 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 BCL7BQ9BQE9 202 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 GRK1Q15835 563 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 METAP1DQ6UB28 335 aaPredicted RBP24.28■■□□□ 1.48
USP42-202ENST00000404008 USP43Q70EL4 1123 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 CROCCP3Q8IVE0 287 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 NDNFQ8TB73 568 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 RAB40AQ8WXH6 277 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 H1FXQ92522 213 aaKnown RBP24.28■■□□□ 1.48
USP42-202ENST00000404008 SLC25A46Q96AG3 418 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 POM121Q96HA1 1249 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 DCTN5Q9BTE1 182 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 TM2D1Q9BX74 207 aa24.28■■□□□ 1.48
USP42-202ENST00000404008 GSX1Q9H4S2 264 aaPredicted RBP24.28■■□□□ 1.48
USP42-202ENST00000404008 RPUSD1Q9UJJ7 312 aaKnown RBP24.28■■□□□ 1.48
USP42-202ENST00000404008 IGHV2-70DA0A0C4DH43 119 aa24.27■■□□□ 1.48
USP42-202ENST00000404008 PLA2G7Q13093 441 aa24.27■■□□□ 1.48
USP42-202ENST00000404008 PPP1R35Q8TAP8 253 aa24.27■■□□□ 1.48
USP42-202ENST00000404008 LPAR5Q9H1C0 372 aa24.27■■□□□ 1.48
USP42-202ENST00000404008 PPA2Q9H2U2 334 aa24.27■■□□□ 1.48
USP42-202ENST00000404008 RCC2Q9P258 522 aaKnown RBP24.27■■□□□ 1.48
USP42-202ENST00000404008 CEPT1Q9Y6K0 416 aa24.27■■□□□ 1.48
USP42-202ENST00000404008 DSCAML1Q8TD84 2053 aa24.27■■□□□ 1.48
USP42-202ENST00000404008 TMEM127O75204 238 aa24.26■■□□□ 1.47
USP42-202ENST00000404008 PAN3Q58A45 887 aaKnown RBP24.26■■□□□ 1.47
USP42-202ENST00000404008 IDNKQ5T6J7 187 aa24.26■■□□□ 1.47
USP42-202ENST00000404008 GDPD3Q7L5L3 318 aa24.26■■□□□ 1.47
USP42-202ENST00000404008 SUMF2Q8NBJ7 301 aa24.26■■□□□ 1.47
USP42-202ENST00000404008 NUDT16L1Q9BRJ7 211 aaKnown RBP24.26■■□□□ 1.47
USP42-202ENST00000404008 NICN1Q9BSH3 213 aa24.26■■□□□ 1.47
USP42-202ENST00000404008 DCSTAMPQ9H295 470 aa24.26■■□□□ 1.47
USP42-202ENST00000404008 INSIG2Q9Y5U4 225 aa24.26■■□□□ 1.47
USP42-202ENST00000404008 HSPB6O14558 160 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 MGST3O14880 152 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 ENSAO43768 121 aaKnown RBP24.25■■□□□ 1.47
USP42-202ENST00000404008 CSN2P05814 226 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 BLMHQ13867 455 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 DCAF12L2Q5VW00 463 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 LY6G5BQ8NDX9 201 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 C8orf46Q8TAG6 207 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 ISOC1Q96CN7 298 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 URM1Q9BTM9 101 aaKnown RBP24.25■■□□□ 1.47
USP42-202ENST00000404008 DPCDQ9BVM2 203 aaPredicted RBP24.25■■□□□ 1.47
USP42-202ENST00000404008 SPACA1Q9HBV2 294 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 RAB22AQ9UL26 194 aa24.25■■□□□ 1.47
USP42-202ENST00000404008 TRBV23-1A0A0A0MS06 115 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 A0A0A6YYD4 124 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 A0A0G2JMP0 313 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 A0A0X1KG70 313 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 KIR2DS1A0A191URI9 304 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 SNRPBP14678 240 aaKnown RBP24.24■■□□□ 1.47
USP42-202ENST00000404008 GATA3P23771 443 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 ATAD3CQ5T2N8 411 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 SIGIRRQ6IA17 410 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 OR4M2Q8NGB6 313 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 LGALS14Q8TCE9 139 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 PTX4Q96A99 478 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 BARHL1Q9BZE3 327 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 KCNS2Q9ULS6 477 aa24.24■■□□□ 1.47
USP42-202ENST00000404008 NOL3O60936 208 aaKnown RBP24.23■■□□□ 1.47
USP42-202ENST00000404008 RAB6AP20340 208 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 EFNB2P52799 333 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 SCAND1P57086 179 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 EDDM3AQ14507 147 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 BPIFB2Q8N4F0 458 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 FAM89BQ8N5H3 189 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 OR4M1Q8NGD0 313 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 MRI1Q9BV20 369 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 RBM38Q9H0Z9 239 aaKnown RBP24.23■■□□□ 1.47
USP42-202ENST00000404008 YAE1D1Q9NRH1 226 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 C19orf12Q9NSK7 152 aa24.23■■□□□ 1.47
USP42-202ENST00000404008 H3BMQ9 156 aa24.22■■□□□ 1.47
USP42-202ENST00000404008 PAHP00439 452 aa24.22■■□□□ 1.47
USP42-202ENST00000404008 EDDM3BP56851 147 aa24.22■■□□□ 1.47
USP42-202ENST00000404008 RPL31P62899 125 aaKnown RBP24.22■■□□□ 1.47
USP42-202ENST00000404008 ATXN7L3Q14CW9 347 aaPredicted RBP24.22■■□□□ 1.47
USP42-202ENST00000404008 SPCS2Q15005 226 aa24.22■■□□□ 1.47
USP42-202ENST00000404008 RAB12Q6IQ22 244 aa24.22■■□□□ 1.47
USP42-202ENST00000404008 BTNL3Q6UXE8 466 aa24.22■■□□□ 1.47
USP42-202ENST00000404008 WNK2Q9Y3S1 2297 aa24.22■■□□□ 1.47
USP42-202ENST00000404008 H3BUI4 141 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 LIPFP07098 398 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 PPIAL4GP0DN37 164 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 FUT3P21217 361 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 ERP29P30040 261 aaKnown RBP24.21■■□□□ 1.47
USP42-202ENST00000404008 KCNJ3P48549 501 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 AESQ08117 197 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 BRICD5Q6PL45 260 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 COQ2Q96H96 371 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 DMRTB1Q96MA1 342 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 PEX16Q9Y5Y5 336 aa24.21■■□□□ 1.47
USP42-202ENST00000404008 A8MV72 311 aaPredicted RBP24.2■■□□□ 1.46
USP42-202ENST00000404008 J3QLI3 93 aa24.2■■□□□ 1.46
USP42-202ENST00000404008 PDCD6O75340 191 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms