RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MYCBPQ99417 103 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 GPER1Q99527 375 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 SSX3Q99909 188 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 PPA2Q9H2U2 334 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 DPAGT1Q9H3H5 408 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 HEXA-AS1Q9H8Q6 139 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 BEX1Q9HBH7 125 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 EXOSC4Q9NPD3 245 aaKnown RBP4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 VPREB3Q9UKI3 123 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 DIMT1Q9UNQ2 313 aaKnown RBP4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 SIGLEC9Q9Y336 463 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 NOTCH3Q9UM47 2321 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 CMYA5Q8N3K9 4069 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 hCG_1809904A0A1W2PP81 198 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 A0A1W2PPE2 198 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 A0A1W2PPK0 400 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 A0A1W2PR64 198 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 A0A1W2PRV1 198 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 hADV38S2A0JD32 116 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 FAM172BPA6NC97 362 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 MAGEA13PA6NCF6 341 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ODF3BA8MYP8 253 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 SLC33A1O00400 549 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 SH2D1BO14796 132 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 MGST3O14880 152 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 CASQ2O14958 399 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 OGG1O15527 345 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 CDRT1O95170 752 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ARG1P05089 322 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 GSTP1P09211 210 aaKnown RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 IGHV1-8P0DP01 117 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 RAB3AP20336 220 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 C21orf33P30042 268 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 GDNFP39905 211 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 CAPGP40121 348 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR3A4PP47883 348 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 GLIPR1P48060 266 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 RAB13P51153 203 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 P2RX3P56373 397 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 LGALS4P56470 323 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ID3Q02535 119 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 MEF2CQ06413 473 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 AESQ08117 197 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 MRPL28Q13084 256 aaKnown RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 DYNC1I2Q13409 638 aaKnown RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ATXN7L3Q14CW9 347 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 LRRC75BQ2VPJ9 315 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 MIDNQ504T8 468 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 SPIN3Q5JUX0 258 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 UTF1Q5T230 341 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 PRAMEF5Q5TYX0 476 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 OLFML2AQ68BL7 652 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 HIST2H2BDQ6DRA6 164 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF529Q6P280 563 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 Q6P435 159 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 GDPGP1Q6ZNW5 385 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 AHSA2Q719I0 299 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 SAXO1Q8IYX7 474 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 C8orf59Q8N0T1 100 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZSCAN4Q8NAM6 433 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF485Q8NCK3 441 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 BPIFB6Q8NFQ5 453 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 LINC01006Q8NI28 216 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 PPP1R35Q8TAP8 253 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 RPS4Y2Q8TD47 263 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 GPR148Q8TDV2 347 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 TNFAIP8L1Q8WVP5 186 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 NRG4Q8WWG1 115 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 GHSRQ92847 366 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM106AQ96A25 262 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 MISP3Q96FF7 219 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 COQ2Q96H96 371 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF714Q96N38 554 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 FAM192AQ9GZU8 254 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 SLITRK2Q9H156 845 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 PPIL3Q9H2H8 161 aaKnown RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 SEBOXQ9HB31 216 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 C8orf4Q9NR00 106 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 BABAM2Q9NXR7 383 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF581Q9P0T4 197 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 GLS2Q9UI32 602 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF281Q9Y2X9 895 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 EXOSC1Q9Y3B2 195 aaKnown RBP4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 MMP24Q9Y5R2 645 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 LINC00312Q9Y6C7 94 aa4.67□□□□□ -1.66
HMGB1P20-201ENST00000402555 TRAV8-7A0A075B6U6 113 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 TRGV10A0A0A0MS01 117 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 IGHV2-26A0A0B4J1V2 119 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 TRAV39A0A0B4J263 110 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 TRAV24A0A0B4J272 114 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 A0A0G2JK05 382 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 TRBV5-5A0A0J9YX44 114 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 A0A1B0GUS0 222 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 IRGMA1A4Y4 181 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 ODAMA1E959 279 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 EFCAB10A6NFE3 127 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 ERICH4A6NGS2 130 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 FAM90A8PA6NJQ4 464 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 H0YJX3 145 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 DEGS1O15121 323 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms