RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 MINOS1-NBL1R4GNA1 71 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 KIAA2026Q5HYC2 2103 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 WNK1Q9H4A3 2382 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 IGHV2-26A0A0B4J1V2 119 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 EFCAB10A6NFE3 127 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 SLC33A1O00400 549 aaPredicted RBP12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 LALBAP00709 142 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 GNAO1P09471 354 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 PAX6P26367 422 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 DYNLT3P51808 116 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 KRTAP10-3P60369 221 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 ST3GAL4Q11206 333 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 IL13RA2Q14627 380 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 LY6EQ16553 131 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 LDLRAD2Q5SZI1 272 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 DMKNQ6E0U4 476 aaPredicted RBP12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 SLC35E4Q6ICL7 350 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 OR52W1Q6IF63 320 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 HEPN1Q6WQI6 88 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 ASCL4Q6XD76 172 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 DYNAPQ8N1N2 210 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 DTX3Q8N9I9 347 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 FBLIM1Q8WUP2 373 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 TNFAIP8L1Q8WVP5 186 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 GGHQ92820 318 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 GPER1Q99527 375 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 CLEC7AQ9BXN2 247 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 VCXQ9H320 206 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 TMEM138Q9NPI0 162 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 PLCXD1Q9NUJ7 323 aa12.03□□□□□ -0.48
SMIM11A-203ENST00000399299 TRBV5-5A0A0J9YX44 114 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 ODAMA1E959 279 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 TIMM23O14925 209 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 DEGS1O15121 323 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 KIR2DS4P43632 304 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 GLIPR1P48060 266 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 TAS2R43P59537 309 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 PPP3R1P63098 170 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 PAX5Q02548 391 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 AESQ08117 197 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 DYNC1I2Q13409 638 aaKnown RBP12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 YIF1BQ5BJH7 314 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 C11orf88Q6PI97 169 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 OR4C13Q8NGP0 309 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 GHSRQ92847 366 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 COQ2Q96H96 371 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 NCOR1P1Q9H4R4 102 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 DCLRE1BQ9H816 532 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 ABCB10Q9NRK6 738 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 PSORS1C1Q9UIG5 152 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 TCF19Q9Y242 345 aa12.02□□□□□ -0.49
SMIM11A-203ENST00000399299 H0YJX3 145 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 M0QZ24 198 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 CHST1O43916 411 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 GPX5O75715 221 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 IGFBP3P17936 291 aaPredicted RBP12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 CD34P28906 385 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 BDKRB2P30411 391 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 GABRA5P31644 462 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 PTGFRP43088 359 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 KCNJ3P48549 501 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 EFNB2P52799 333 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 SCN1BQ07699 218 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 RSU1Q15404 277 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 FAM189A2Q15884 450 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 SSX2Q16385 188 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 Q499Y3 187 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 NHLRC3Q5JS37 347 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 KRBOX4Q5JUW0 171 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 LAIR2Q6ISS4 152 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 RTN4RL2Q86UN3 420 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 SATL1Q86VE3 508 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 PGLYRP3Q96LB9 341 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 NPFFR1Q9GZQ6 430 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 FAM192AQ9GZU8 254 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 TCF7L1Q9HCS4 588 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 OR6C3Q9NZP0 311 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 PITPNC1Q9UKF7 332 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
SMIM11A-203ENST00000399299 TRAV24A0A0B4J272 114 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 MEGF11A6BM72 1044 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 ZNF729A6NN14 1252 aaPredicted RBP12□□□□□ -0.49
SMIM11A-203ENST00000399299 XPNPEP2O43895 674 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 MMP23AO75900 390 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 FSTP19883 344 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 CDK2P24941 298 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 ZNF93P35789 620 aaPredicted RBP12□□□□□ -0.49
SMIM11A-203ENST00000399299 RPS11P62280 158 aaKnown RBP eCLIP12□□□□□ -0.49
SMIM11A-203ENST00000399299 RIPK1Q13546 671 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 ATXN7L3Q14CW9 347 aaPredicted RBP12□□□□□ -0.49
SMIM11A-203ENST00000399299 PAN3Q58A45 887 aaKnown RBP12□□□□□ -0.49
SMIM11A-203ENST00000399299 DDI2Q5TDH0 399 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 PRAMEF5Q5TYX0 476 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 OR4P4Q8NGL7 312 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 OR13C5Q8NGS8 318 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 NDNFQ8TB73 568 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 ZNF596Q8TC21 504 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 TFAP2CQ92754 450 aa12□□□□□ -0.49
SMIM11A-203ENST00000399299 IFT22Q9H7X7 185 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms