RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 LMO1P25800 156 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 HYAL1Q12794 435 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF266Q14584 549 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 P2RY6Q15077 328 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 FAM180AQ6UWF9 173 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 OR2C3Q8N628 320 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 PLPP5Q8NEB5 264 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 RLN3Q8WXF3 142 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 RAB24Q969Q5 203 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 C18orf12Q96KH6 178 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 MRGPRX4Q96LA9 322 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 CDX2Q99626 313 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF581Q9P0T4 197 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 BRWD1Q9NSI6 2320 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 CCDC187A0A096LP49 1063 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 A0A1W2PPC4 97 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 FAM230AA0A1W2PPH8 454 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 HSD17B6O14756 317 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 MSTNO14793 375 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 SPRY1O43609 319 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-206ENST00000397163 TLX3O43711 291 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-206ENST00000397163 FOLR1P15328 257 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 PAX1P15863 534 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 TDGF1P3P51864 188 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 CLDN17P56750 224 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 TMEM176BQ3YBM2 270 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-206ENST00000397163 SLC22A25Q6T423 547 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF705AQ6ZN79 300 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-206ENST00000397163 DTX1Q86Y01 620 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 MSI2Q96DH6 328 aaKnown RBP7.97□□□□□ -1.13
CAPN3-206ENST00000397163 GAB2Q9UQC2 676 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 MED12Q93074 2177 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 H3BMH7 237 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 HSPA12AO43301 675 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 ONECUT2O95948 504 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 SRP19P09132 144 aaKnown RBP7.96□□□□□ -1.13
CAPN3-206ENST00000397163 TMEM123Q8N131 208 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 POC1BQ8TC44 478 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 BOD1Q96IK1 185 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 NOL4LQ96MY1 436 aaPredicted RBP7.96□□□□□ -1.13
CAPN3-206ENST00000397163 OXGR1Q96P68 337 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 DIRC2Q96SL1 478 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 NIPSNAP3BQ9BS92 247 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 METTL7AQ9H8H3 244 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 GPR27Q9NS67 375 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 SEMA5BQ9P283 1151 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 MMP17Q9ULZ9 603 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 SLC7A11Q9UPY5 501 aa7.96□□□□□ -1.13
CAPN3-206ENST00000397163 A0A1B0GX78 115 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 M0R143 59 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 DBHP09172 617 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 PNLIPP16233 465 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 NOVA1P51513 510 aaKnown RBP7.96□□□□□ -1.14
CAPN3-206ENST00000397163 OR1D5P58170 312 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 HERV-K104P61576 105 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 HNRNPKP61978 463 aaKnown RBP eCLIP7.96□□□□□ -1.14
CAPN3-206ENST00000397163 EIF3IQ13347 325 aaKnown RBP7.96□□□□□ -1.14
CAPN3-206ENST00000397163 PLPPR5Q32ZL2 321 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 SPSB3Q6PJ21 355 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 SLC35G3Q8N808 338 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 LRTM2Q8N967 370 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 GJC3Q8NFK1 279 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 TVP23CQ96ET8 276 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 KIAA1456Q9P272 454 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 CD207Q9UJ71 328 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 TMED3Q9Y3Q3 217 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 WSB1Q9Y6I7 421 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 V9GYS6 101 aa7.96□□□□□ -1.14
CAPN3-206ENST00000397163 TRBV11-1A0A0K0K1C0 115 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 NKX2-6A6NCS4 301 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 TCF21O43680 179 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 CD55P08174 381 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 MSR1P21757 451 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 TFPI2P48307 235 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 VAMP2P63027 116 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 KCNMB1Q16558 191 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 PRSS8Q16651 343 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 FAM69BQ5VUD6 431 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 TIPARPQ7Z3E1 657 aaKnown RBP7.95□□□□□ -1.14
CAPN3-206ENST00000397163 FBXL14Q8N1E6 418 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 CCDC71LQ8N9Z2 235 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 ELOVL1Q9BW60 279 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 CHRNA10Q9GZZ6 450 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 MAGT1Q9H0U3 335 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 MYO7BQ6PIF6 2116 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 A0A0U1RQV5 110 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 IGSF23A1L1A6 192 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 M0R135 149 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 DTYMKP23919 212 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 NKX2-1P43699 371 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-206ENST00000397163 PRSS12P56730 875 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 PMS2P11Q13670 270 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 ARSJQ5FYB0 599 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-206ENST00000397163 C1orf87Q8N0U7 546 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 TMEM217Q8N7C4 229 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF799Q96GE5 643 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 PLEK2Q9NYT0 353 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 THADAQ6YHU6 1953 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 PCDH15Q96QU1 1955 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 TRANK1O15050 2925 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms