RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 DSCAML1Q8TD84 2053 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 ODAMA1E959 279 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 ZNF729A6NN14 1252 aaPredicted RBP13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 NUDT19A8MXV4 375 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 H0YHG0 523 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 MAGEB4O15481 346 aaPredicted RBP13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 INMTO95050 263 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 DUSP1P28562 367 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 NPBWR2P48146 333 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 FAHD1Q6P587 224 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 PLEKHG7Q6ZR37 379 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 ZNF329Q86UD4 541 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 ZNF565Q8N9K5 539 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 OR9G1Q8NH87 305 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 RPEQ96AT9 228 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 GON7Q9BXV9 100 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 COMMD4Q9H0A8 199 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 ZNF286AQ9HBT8 521 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 NEK6Q9HC98 313 aa13.87□□□□□ -0.19
EXOSC3-202ENST00000396521 DNAH9Q9NYC9 4486 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 OR2H2O95918 312 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 BCL3P20749 454 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 PDZK1IP1Q13113 114 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 TMEM244Q5VVB8 128 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 ZNF695Q8IW36 515 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 FOXRED2Q8IWF2 684 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 TCEANCQ8N8B7 351 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 NCOR1P1Q9H4R4 102 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 IL36RNQ9UBH0 155 aa13.86□□□□□ -0.19
EXOSC3-202ENST00000396521 SERPINE3A8MV23 424 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 SIRPB1O00241 398 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 OCM2P0CE71 109 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 OCMP0CE72 109 aaPredicted RBP13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 GLIPR1P48060 266 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 POU3F4P49335 361 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 RAB7AP51149 207 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 AESQ08117 197 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 TMED1Q13445 227 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 ODF4Q2M2E3 257 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 SLC16A12Q6ZSM3 486 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 SAXO1Q8IYX7 474 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 OR8H3Q8N146 312 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 HAVCR2Q8TDQ0 301 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 TOMM40LQ969M1 308 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 HRASLS5Q96KN8 279 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 GSTK1Q9Y2Q3 226 aa13.85□□□□□ -0.19
EXOSC3-202ENST00000396521 STAB2Q8WWQ8 2551 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 KBTBD11-OT1A0A1B0GTJ5 212 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 LOC107986453A0A1B0GWG9 222 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 IGHG2P01859 326 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 CCDC159P0C7I6 412 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 ATF1P18846 271 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 MADCAM1Q13477 382 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 RBM39Q14498 530 aaKnown RBP13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 ZSCAN26Q16670 478 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 KRBOX4Q5JUW0 171 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 TEX38Q6PEX7 206 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 C8orf86Q6ZUL3 223 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM220AQ7Z4H9 259 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 C5orf56Q8N8D9 126 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 KLHL30-AS1Q8NEE0 82 aa13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 LSM4Q9Y4Z0 139 aaKnown RBP13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 SIRT4Q9Y6E7 314 aaPredicted RBP13.84□□□□□ -0.19
EXOSC3-202ENST00000396521 A0A1W2PQL4 384 aaPredicted RBP13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 SH2D7A6NKC9 451 aaPredicted RBP13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 ZAR1LA6NP61 321 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 CCL24O00175 119 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 FKBP6O75344 327 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 KDM4BO94953 1096 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 MT-ND2P03891 347 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 ISG15P05161 165 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 ZNF44P15621 663 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 HTR1FP30939 366 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 ATP6V1E1P36543 226 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 DAPP51397 102 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 C9orf66Q5T8R8 295 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 BAIAP2L2Q6UXY1 529 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 BCDIN3DQ7Z5W3 292 aaKnown RBP13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 KCTD20Q7Z5Y7 419 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 SLC35E3Q7Z769 313 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 TFAP2CQ92754 450 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 OPALINQ96PE5 141 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 LINC00574Q9H8X3 128 aa13.83□□□□□ -0.2
EXOSC3-202ENST00000396521 IGKV1-9A0A0C4DH69 117 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 J3QR06 171 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 DEGS1O15121 323 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 SNRNP70P08621 437 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 RPSAP08865 295 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 ZNF20P17024 532 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 TMEM11P17152 192 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 C21orf33P30042 268 aaPredicted RBP13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 HES1Q14469 280 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 C12orf73Q69YU5 71 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 SSX6Q7RTT6 188 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 PRSS35Q8N3Z0 413 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 OR10A7Q8NGE5 316 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 OR5M8Q8NGP6 311 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 OR8U1Q8NH10 309 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 OR56B4Q8NH76 319 aa13.82□□□□□ -0.2
EXOSC3-202ENST00000396521 RFKQ969G6 155 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms