RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 ARR3P36575 388 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 WNT5AP41221 380 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 GPM6AP51674 278 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 FOXRED2Q8IWF2 684 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 RRNAD1Q96FB5 475 aaKnown RBP11.99□□□□□ -0.49
SNCA-204ENST00000394989 MED12LQ86YW9 2145 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 TRBV6-7A0A0A0MS04 114 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 LILRA1O75019 489 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 DAOP14920 347 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 PGAM2P15259 253 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 DHRS11Q6UWP2 260 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 CCDC36Q8IYA8 594 aa11.99□□□□□ -0.49
SNCA-204ENST00000394989 SLC22A20A6NK97 555 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 PDCD6O75340 191 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 BCL3P20749 454 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 KRBOX4Q5JUW0 171 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 MRPL21Q7Z2W9 205 aaKnown RBP11.98□□□□□ -0.49
SNCA-204ENST00000394989 OR1K1Q8NGR3 316 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 C14orf79Q96F83 325 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 URB1O60287 2271 aaKnown RBP11.98□□□□□ -0.49
SNCA-204ENST00000394989 A0A1W2PPE3 182 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 CST4P01036 141 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 CD82P27701 267 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 IL15RAQ13261 267 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 CEACAM21Q3KPI0 293 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 FBXW9Q5XUX1 488 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 TMEM178AQ8NBL3 297 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 FDCSPQ8NFU4 85 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 SLAMF9Q96A28 289 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 PIGMQ9H3S5 423 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 NECAP2Q9NVZ3 263 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 IL36RNQ9UBH0 155 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 OR7C1O76099 320 aaPredicted RBP11.98□□□□□ -0.49
SNCA-204ENST00000394989 ID4P47928 161 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 MALLQ13021 153 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 SLC22A25Q6T423 547 aa11.98□□□□□ -0.49
SNCA-204ENST00000394989 BCL2L2Q92843 193 aaPredicted RBP11.98□□□□□ -0.49
SNCA-204ENST00000394989 C14orf166Q9Y224 244 aaKnown RBP11.98□□□□□ -0.49
SNCA-204ENST00000394989 CTSDP07339 412 aaPredicted RBP11.97□□□□□ -0.49
SNCA-204ENST00000394989 SPINK2P20155 84 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 ZDHHC23Q8IYP9 409 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 INO80EQ8NBZ0 244 aaPredicted RBP11.97□□□□□ -0.49
SNCA-204ENST00000394989 CNTNAP3BQ96NU0 1288 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 ZFP57Q9NU63 452 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 MTCH1Q9NZJ7 389 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 OR5AC2Q9NZP5 309 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 CRYM-AS1A6NIL9 109 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 ECI1P42126 302 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 CCL11P51671 97 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 OR2B8PP59922 312 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 CYCSP99999 105 aaKnown RBP11.97□□□□□ -0.49
SNCA-204ENST00000394989 FABP9Q0Z7S8 132 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 CLN3Q13286 438 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 PEA15Q15121 130 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 MYPOPQ86VE0 399 aaPredicted RBP11.97□□□□□ -0.49
SNCA-204ENST00000394989 POC1AQ8NBT0 407 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 DCUN1D4Q92564 292 aa11.97□□□□□ -0.49
SNCA-204ENST00000394989 SHANK1Q9Y566 2161 aa11.96□□□□□ -0.49
SNCA-204ENST00000394989 IFNA2P01563 188 aa11.96□□□□□ -0.49
SNCA-204ENST00000394989 HOXB5P09067 269 aa11.96□□□□□ -0.49
SNCA-204ENST00000394989 FUT3P21217 361 aa11.96□□□□□ -0.49
SNCA-204ENST00000394989 OR51B6Q9H340 312 aa11.96□□□□□ -0.49
SNCA-204ENST00000394989 METTL8Q9H825 291 aaKnown RBP11.96□□□□□ -0.49
SNCA-204ENST00000394989 A0A1B0GV50 99 aa11.96□□□□□ -0.5
SNCA-204ENST00000394989 MSGN1A6NI15 193 aa11.96□□□□□ -0.5
SNCA-204ENST00000394989 CD300LBA8K4G0 201 aa11.96□□□□□ -0.5
SNCA-204ENST00000394989 ZNF732B4DXR9 585 aa11.96□□□□□ -0.5
SNCA-204ENST00000394989 NQO2P16083 231 aa11.96□□□□□ -0.5
SNCA-204ENST00000394989 PLP2Q04941 152 aa11.96□□□□□ -0.5
SNCA-204ENST00000394989 MDP1Q86V88 176 aa11.96□□□□□ -0.5
SNCA-204ENST00000394989 LYL1P12980 280 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 PTAFRP25105 342 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 EIF2S3LQ2VIR3 472 aaKnown RBP11.95□□□□□ -0.5
SNCA-204ENST00000394989 C5orf24Q7Z6I8 188 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 TOMM40LQ969M1 308 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 ZNF442Q9H7R0 627 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 TINAGQ9UJW2 476 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 PIGPP57054 158 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 RAB32Q13637 225 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 LURAP1LQ8IV03 231 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 C2orf50Q96LR7 162 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 CLCC1Q96S66 551 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 RPS10P5Q9NQ39 176 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 TEX13DA0A0J9YY54 714 aaPredicted RBP11.95□□□□□ -0.5
SNCA-204ENST00000394989 SYNGR1O43759 233 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 SNAPINO95295 136 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 FCGR2CP31995 323 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 RAB5BP61020 215 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 FGF12P61328 243 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 NCMAPQ5T1S8 102 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 TMEM211Q6ICI0 200 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 OR4A4PQ8NGN8 299 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 GP6Q9HCN6 339 aa11.95□□□□□ -0.5
SNCA-204ENST00000394989 AKAP13Q12802 2813 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 APLNRP35414 380 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 PMELP40967 661 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 FXYD4P59646 89 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 S100A12P80511 92 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 IGFBP7Q16270 282 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms